RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 RSG1Q9BU20 258 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 NKX2-6A6NCS4 301 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TCF21O43680 179 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ACTL6AO96019 429 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 NAT2P11245 290 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 POLR2GP62487 172 aaKnown RBP eCLIP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 RELBQ01201 579 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 DNLZQ5SXM8 178 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 NCMAPQ5T1S8 102 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ATG4DQ86TL0 474 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 OR1L8Q8NGR8 309 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 LPAR5Q9H1C0 372 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 P4HTMQ9NXG6 502 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF256Q9Y2P7 627 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 KCNAB3O43448 404 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MPDU1O75352 247 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 SLC23A3Q6PIS1 610 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 SYT8Q8NBV8 401 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 OR8B3Q8NGG8 313 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MRGPRFQ96AM1 343 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 OR8B2Q96RD0 313 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 OR2H1Q9GZK4 316 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MSL2Q9HCI7 577 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 IL19Q9UHD0 177 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 HLA-DQA1P01909 254 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MMP16P51512 607 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MVDP53602 400 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM196Q5HYL7 178 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 PTP4A1Q93096 173 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MEGF10Q96KG7 1140 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 P2RX4Q99571 388 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 MFRPQ9BY79 579 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 CHRNA10Q9GZZ6 450 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 RAB33BQ9H082 229 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 C1RLQ9NZP8 487 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 ELF5Q9UKW6 265 aaPredicted RBP4.21□□□□□ -1.73
RC3H1-201ENST00000258349 ZMIZ1Q9ULJ6 1067 aa4.21□□□□□ -1.73
RC3H1-201ENST00000258349 SHISA8B8ZZ34 492 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 FSTP19883 344 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 METAP1P53582 386 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 DLX1P56177 255 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 EWSR1Q01844 656 aaKnown RBP eCLIP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TMEM240Q5SV17 173 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 OTPQ5XKR4 325 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TMPRSS2O15393 492 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 CRXO43186 299 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 CD82P27701 267 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 HOXA4Q00056 320 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 KIAA0040Q15053 153 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 PMCHL1Q16048 86 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 LIMS2Q7Z4I7 341 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZNF683Q8IZ20 524 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 SSMEM1Q8WWF3 244 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ISOC2Q96AB3 205 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 RBM14Q96PK6 669 aaKnown RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 F2RL2O00254 374 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZNF253O75346 499 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 HOGA1Q86XE5 327 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TDHQ8IZJ6 230 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 MRPS16Q9Y3D3 137 aaKnown RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 EID2BQ96D98 161 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 PAXXQ9BUH6 204 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 SNURFLB1AK76 121 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TNFSF14O43557 240 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TTRP02766 147 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 FAM157CP0CG43 387 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TNXAQ16473 311 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 WFIKKN1Q96NZ8 548 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 GNG7O60262 68 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 CSN3P07498 182 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZXDAP98168 799 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 MEF2BQ02080 365 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 LINC01555Q8NAE3 123 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 OR2I1PQ8NGU4 316 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 FBLIM1Q8WUP2 373 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 GNRHR2Q96P88 292 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 GPR61Q9BZJ8 451 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ALX4Q9H161 411 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 MIXL1Q9H2W2 232 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZFP64Q9NPA5 681 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 SLC52A3Q9NQ40 469 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 METTL1Q9UBP6 276 aaKnown RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 GABRG2P18507 467 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZIC1Q15915 447 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 MESTQ5EB52 335 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ZNF645Q8N7E2 425 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 ASB5Q8WWX0 329 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 RGP1Q92546 391 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-201ENST00000258349 TBX15Q96SF7 602 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 CLEC5AQ9NY25 188 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 KLK13Q9UKR3 277 aa4.21□□□□□ -1.74
RC3H1-201ENST00000258349 IGHV5-51A0A0C4DH38 117 aa4.2□□□□□ -1.74
RC3H1-201ENST00000258349 A8MWL6 223 aa4.2□□□□□ -1.74
RC3H1-201ENST00000258349 RPL36A-HNRNPH2H7BZ11 118 aa4.2□□□□□ -1.74
RC3H1-201ENST00000258349 K7N7A8 449 aa4.2□□□□□ -1.74
RC3H1-201ENST00000258349 CCR2P41597 374 aa4.2□□□□□ -1.74
RC3H1-201ENST00000258349 PIGYQ3MUY2 71 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms