RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 M0R1W7 72 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 MPDU1O75352 247 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 PPYP01298 95 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 IAPPP10997 89 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 CHEK1O14757 476 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 FFAR1O14842 300 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 HBZP02008 142 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 PCNPQ8WW12 178 aaKnown RBP11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 TREM2Q9NZC2 230 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 C4orf51C9J302 202 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNF14P17017 642 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 AESQ08117 197 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 IL22RA2Q969J5 263 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 LHFPL6Q9Y693 200 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM3AP98173 230 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 OR4D11Q8NGI4 311 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 WDR13Q9H1Z4 485 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 MED9Q9NWA0 146 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 A6NNC1 897 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 KIAA1324LA8MWY0 1029 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 IGHV3-13P01766 116 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 SRD5A1P18405 259 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 LYZP61626 148 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 BTNL8Q6UX41 500 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 STARD4Q96DR4 205 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 CLCF1Q9UBD9 225 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 SPCS3P61009 180 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 UBE2KP61086 200 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 DGCR2P98153 550 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 SLC35E3Q7Z769 313 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 LSM10Q969L4 123 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 MRPL22Q9NWU5 206 aaKnown RBP11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 ARF6P62330 175 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 GUCA2BQ16661 112 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
PRPF38A-201ENST00000257181 TRBV5-5A0A0J9YX44 114 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 PSG9Q00887 426 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 FUT5Q11128 374 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 RNF5Q99942 180 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 KPTNQ9Y664 436 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 J3QR06 171 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 CELA3AP09093 270 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 LRRC75BQ2VPJ9 315 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 PNKDQ8N490 385 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 HIGD1AQ9Y241 93 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 TBL2Q9Y4P3 447 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 V9GYS6 101 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 P2RY1P47900 373 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 KCNRGQ8N5I3 272 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 YIPF5Q969M3 257 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 PTPRZ1P23471 2315 aaPredicted RBP11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 IGKV1D-42A0A075B6H8 117 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 ENDOGQ14249 297 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 C19orf24Q9BVV8 132 aa11.49□□□□□ -0.57
PRPF38A-201ENST00000257181 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 SEMG1P04279 462 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 COX19Q49B96 90 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 H0Y980 276 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 MOSP00540 346 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 MVDP53602 400 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 OPCMLQ14982 345 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 SOHLH1Q5JUK2 328 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNF343Q6P1L6 599 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 TBC1D26Q86UD7 250 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 RXFP4Q8TDU9 374 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNRF4Q8WWF5 429 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 C11orf54Q9H0W9 315 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 FBXO24O75426 580 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 TDGF1P13385 188 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 NPY1RP25929 384 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 FRZBQ92765 325 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 MAGEB4O15481 346 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 SYNGR2O43760 224 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms