RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 FHL5Q5TD97 284 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 GSX1Q9H4S2 264 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 HBZP02008 142 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 FAM210BQ96KR6 192 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 PGLYRP3Q96LB9 341 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CISD1Q9NZ45 108 aaKnown RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CRXO43186 299 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-201ENST00000254630 IGHMP01871 453 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CD1AP06126 327 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 HERVK_113P61574 105 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM255AQ5JRV8 349 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 FAM222BQ8WU58 562 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
PTCD3-201ENST00000254630 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 CEBPDP49716 269 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 CDCP2Q5VXM1 449 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 SNRNP40Q96DI7 357 aaKnown RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 C12orf57Q99622 126 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 WASHC3Q9Y3C0 194 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 GREB1LQ9C091 1923 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 LOC101059948A0A1B0GTJ6 334 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 FSTP19883 344 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 OR11H7Q8NGC8 314 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM54Q969K7 222 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 GPA33Q99795 319 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 SIPA1L1O43166 1804 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 A0A0G2JMZ2 1700 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 DEDDO75618 318 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 CRHP06850 196 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 RNF224P0DH78 156 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 MGAT2Q10469 447 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 ZCCHC14Q8WYQ9 949 aaKnown RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 MRPS18AQ9NVS2 196 aaKnown RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 AUP1Q9Y679 476 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 DSPPQ9NZW4 1301 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 GREM1O60565 184 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 TCL1AP56279 114 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 IZUMO4Q1ZYL8 232 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-201ENST00000254630 SFXN3Q9BWM7 321 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 ELOVL5Q9NYP7 299 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 C1QCP02747 245 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 LIMS1P48059 325 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 PDLIM4P50479 330 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 KLRB1Q12918 225 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 SNAI3Q3KNW1 292 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 PTX4Q96A99 478 aa7.55□□□□□ -1.2
PTCD3-201ENST00000254630 PRR19A6NJB7 356 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 RHBDL1O75783 438 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 APCSP02743 223 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 FUT5Q11128 374 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 FAM74A3Q4VXF1 159 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 PAXXQ9BUH6 204 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 CDRT15L2A8MXV6 281 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 NANOS3P60323 173 aaKnown RBP7.54□□□□□ -1.2
PTCD3-201ENST00000254630 DLK1P80370 383 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 PCOLCEQ15113 449 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 OR8I2Q8N0Y5 310 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 ANGPTL6Q8NI99 470 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 DNASE2BQ8WZ79 361 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 SNX22Q96L94 193 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 METTL26Q96S19 204 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 PRDM6Q9NQX0 595 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MFSD2BA6NFX1 497 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 DLL1O00548 723 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 FAM157CP0CG43 387 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 RPL7P18124 248 aaKnown RBP7.54□□□□□ -1.2
PTCD3-201ENST00000254630 COL8A1P27658 744 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 PNRC1Q12796 327 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF273Q14593 569 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 HLA-DRB5Q30154 266 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 SLC35E3Q7Z769 313 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 OR8G5Q8NG78 346 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 HELTA6NFD8 242 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 H0Y980 276 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MFNGO00587 321 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MGST3O14880 152 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 UBE2L6O14933 153 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 PAGE4O60829 102 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 NUBP1P53384 320 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 B2MP61769 119 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 TWIST1Q15672 202 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 FAM24BQ8N5W8 94 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 SOSTQ9BQB4 213 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 RBKSQ9H477 322 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 C4orf51C9J302 202 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 J3QR89 54 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 IGF2P01344 180 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 EBLN2Q6P2I7 272 aa7.54□□□□□ -1.2
PTCD3-201ENST00000254630 MS4A3Q96HJ5 214 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms