RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 NHLRC4P0CG21 123 aaPredicted RBP8.05□□□□□ -1.12
VPS50-201ENST00000251739 IGHV3-43DP0DP04 118 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 SERPINA2P20848 420 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 IL3RAP26951 378 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 DCKP27707 260 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 PSMB8P28062 276 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 BDKRB2P30411 391 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 ZNF134P52741 427 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 RPS11P62280 158 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS50-201ENST00000251739 RIPK1Q13546 671 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 CXorf66Q5JRM2 361 aaPredicted RBP8.05□□□□□ -1.12
VPS50-201ENST00000251739 OR2G6Q5TZ20 316 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 C4orf3Q8WVX3 66 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 TFAP2CQ92754 450 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 ZNF184Q99676 751 aaPredicted RBP8.05□□□□□ -1.12
VPS50-201ENST00000251739 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 SACSQ9NZJ4 4579 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 TENM2Q9NT68 2774 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 TRAV8-7A0A075B6U6 113 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 TRBV5-7A0A0A0MS05 114 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 AIPO00170 330 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 RGS13O14921 159 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 CSTBP04080 98 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 GTF2F2P13984 249 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 PPIFP30405 207 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 F2RL1P55085 397 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 PPP3R1P63098 170 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 LSAMPQ13449 338 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 KIAA0141Q14154 515 aaPredicted RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 SLC22A6Q4U2R8 563 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 CT45A1Q5HYN5 189 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 ATAD3CQ5T2N8 411 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 C9orf66Q5T8R8 295 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 ASPHD1Q5U4P2 390 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 STEAP3Q658P3 488 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 DMKNQ6E0U4 476 aaPredicted RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 UNQ9370/PRO34162Q6UXP9 181 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 OR5M8Q8NGP6 311 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 CT45A3Q8NHU0 189 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 CCDC107Q8WV48 283 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 RBMXL1Q96E39 390 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 MRPS24Q96EL2 167 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 CYYR1Q96J86 154 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 RDH12Q96NR8 316 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 SPACA1Q9HBV2 294 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 ING4Q9UNL4 249 aa8.04□□□□□ -1.12
VPS50-201ENST00000251739 DIMT1Q9UNQ2 313 aaKnown RBP8.04□□□□□ -1.12
VPS50-201ENST00000251739 FAM90A10PA6NDY2 464 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 FAM90A7PA6NKC0 464 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 FAM90A23PA8MXZ1 464 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 LANCL1O43813 399 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 CA11O75493 328 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 HBZP02008 142 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 SOX6P35712 828 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 RUNX1Q01196 453 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 Q499Y3 187 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 SYT6Q5T7P8 510 aaPredicted RBP8.03□□□□□ -1.12
VPS50-201ENST00000251739 SIGIRRQ6IA17 410 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 OR1L1Q8NH94 360 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 GHSRQ92847 366 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 Q96M66 194 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 KCTD7Q96MP8 289 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 PRR25Q96S07 402 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 RASL11BQ9BPW5 248 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 MBNL3Q9NUK0 354 aaKnown RBP8.03□□□□□ -1.12
VPS50-201ENST00000251739 BABAM2Q9NXR7 383 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 U3KQK5 164 aa8.03□□□□□ -1.12
VPS50-201ENST00000251739 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 SEC14L6B5MCN3 397 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 I3L521 148 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 SPINT2O43291 252 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 HLA-DRB1P01911 266 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 GLAP06280 429 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 RCC1P18754 421 aaPredicted RBP8.02□□□□□ -1.13
VPS50-201ENST00000251739 VDAC1P21796 283 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 RAB25P57735 213 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 ADARB1P78563 741 aaKnown RBP8.02□□□□□ -1.13
VPS50-201ENST00000251739 GPR176Q14439 515 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 YIF1BQ5BJH7 314 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 C19orf54Q5BKX5 351 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 C6orf141Q5SZD1 244 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 C6orf183Q5T699 404 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 RAB12Q6IQ22 244 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 TRAT1Q6PIZ9 186 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 TMPRSS11AQ6ZMR5 421 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 ZNF554Q86TJ5 538 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 CDH26Q8IXH8 852 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 ODF3L1Q8IXM7 274 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 MFSD4AQ8N468 514 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 STX19Q8N4C7 294 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 NEK7Q8TDX7 302 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 UBE2E2Q96LR5 201 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 S100A13Q99584 98 aa8.02□□□□□ -1.13
VPS50-201ENST00000251739 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms