RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 RAB12Q6IQ22 244 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 FAM53AQ6NSI3 398 aaPredicted RBP16.57■□□□□ 0.24
NEDD8-201ENST00000250495 ZFP41Q8N8Y5 198 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF485Q8NCK3 441 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 OR4K15Q8NH41 348 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 FBLIM1Q8WUP2 373 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 GGHQ92820 318 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 S1PR3Q99500 378 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 PLSCR3Q9NRY6 295 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 BLOC1S6Q9UL45 172 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 PEX16Q9Y5Y5 336 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 TRBV5-7A0A0A0MS05 114 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 A0A1W2PPK0 400 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 FAM90A10PA6NDY2 464 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 FAM90A7PA6NKC0 464 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 FAM90A23PA8MXZ1 464 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 GLAP06280 429 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF137PP52743 207 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 ST3GAL4Q11206 333 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 GPR50Q13585 617 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 CXorf66Q5JRM2 361 aaPredicted RBP16.56■□□□□ 0.24
NEDD8-201ENST00000250495 AWAT2Q6E213 333 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 GAPTQ8N292 157 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 OR14A2Q96R54 314 aa16.56■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF736B4DX44 427 aaPredicted RBP16.55■□□□□ 0.24
NEDD8-201ENST00000250495 CCL24O00175 119 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 SLC31A2O15432 143 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 HBZP02008 142 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 MAS1P04201 325 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 ELANEP08246 267 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF134P52741 427 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 CT45A1Q5HYN5 189 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 PRR18Q8N4B5 295 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF439Q8NDP4 499 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 CT45A3Q8NHU0 189 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 SELENOIQ9C0D9 397 aa16.55■□□□□ 0.24
NEDD8-201ENST00000250495 EFCAB10A6NFE3 127 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 RPLP1P05386 114 aaKnown RBP16.54■□□□□ 0.24
NEDD8-201ENST00000250495 MGMTP16455 207 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 FUT3P21217 361 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 SOX6P35712 828 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 CDX1P47902 265 aaPredicted RBP16.54■□□□□ 0.24
NEDD8-201ENST00000250495 CD69Q07108 199 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 FOXE3Q13461 319 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 DOC2BQ14184 412 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 KIR2DS1Q14954 304 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 OR1L1Q8NH94 360 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 THRSPQ92748 146 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 RAX2Q96IS3 184 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 RBM38Q9H0Z9 239 aaKnown RBP16.54■□□□□ 0.24
NEDD8-201ENST00000250495 BANF2Q9H503 90 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 KCNIP1Q9NZI2 227 aa16.54■□□□□ 0.24
NEDD8-201ENST00000250495 CRTAPO75718 401 aaPredicted RBP16.53■□□□□ 0.24
NEDD8-201ENST00000250495 SC5DO75845 299 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 CD1AP06126 327 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 RCC1P18754 421 aaPredicted RBP16.53■□□□□ 0.24
NEDD8-201ENST00000250495 RAB25P57735 213 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 DGCR2P98153 550 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 C6orf141Q5SZD1 244 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF773Q6PK81 442 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 FAM71E2Q8N5Q1 922 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 RNF152Q8N8N0 203 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 OR8U1Q8NH10 309 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 DGCR14Q96DF8 476 aaKnown RBP16.53■□□□□ 0.24
NEDD8-201ENST00000250495 DUX3Q96PT4 197 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 DERL3Q96Q80 235 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 B9D2Q9BPU9 175 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 TAF9BQ9HBM6 251 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 OR2S2Q9NQN1 319 aa16.53■□□□□ 0.24
NEDD8-201ENST00000250495 CNOT2Q9NZN8 540 aaKnown RBP16.53■□□□□ 0.24
NEDD8-201ENST00000250495 PNMA8CA0A1B0GUJ8 204 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 LANCL1O43813 399 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 RAMP3O60896 148 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 CELP19835 753 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 VDAC1P21796 283 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 F2RL1P55085 397 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 MORN2Q502X0 79 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 ZNF554Q86TJ5 538 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 LYPD6Q86Y78 171 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 NKAIN3Q8N8D7 197 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 Q96M66 194 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 CHCHD6Q9BRQ6 235 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 UQCC2Q9BRT2 126 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.52■□□□□ 0.24
NEDD8-201ENST00000250495 GHRLQ9UBU3 117 aa16.52■□□□□ 0.24
NEDD8-201ENST00000250495 UBE2QL1A1L167 161 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 MYL12BO14950 172 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 IGHG4P01861 327 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 OR5H8P0DN80 308 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 CRHBPP24387 322 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 MAPK3P27361 379 aaPredicted RBP16.51■□□□□ 0.23
NEDD8-201ENST00000250495 WNT4P56705 351 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 LCNL1Q6ZST4 164 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 OR5M8Q8NGP6 311 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 VCX3AQ9NNX9 186 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
NEDD8-201ENST00000250495 ZNF580Q9UK33 172 aa16.51■□□□□ 0.23
NEDD8-201ENST00000250495 MRPS14O60783 128 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms