RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 BATF2Q8N1L9 274 aa14.49□□□□□ -0.09
FOXA1-201ENST00000250448 NIPSNAP3BQ9BS92 247 aa14.49□□□□□ -0.09
FOXA1-201ENST00000250448 URGCP-MRPS24S4R325 110 aa14.49□□□□□ -0.09
FOXA1-201ENST00000250448 ERVFRD-1P60508 538 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 BAXQ07812 192 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 TMEM217Q8N7C4 229 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 CLDND2Q8NHS1 167 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 RBMXL1Q96E39 390 aaKnown RBP14.48□□□□□ -0.09
FOXA1-201ENST00000250448 UFSP2Q9NUQ7 469 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 TREM2Q9NZC2 230 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 CXorf65A6NEN9 183 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 SYNGR4O95473 234 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 LY86O95711 162 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 TMEM50AO95807 157 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 C9orf152Q5JTZ5 239 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 IGFL2Q6UWQ7 119 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 CALHM1Q8IU99 346 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 EXTL1Q92935 676 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 PARPBPQ9NWS1 579 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 TGIF2-C20orf24A0A0A6YYL0 155 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 ZNF816-ZNF321PA0A0X1KG74 233 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 DUXBA0A1W2PPF3 345 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 RPL36A-HNRNPH2H7BZ11 118 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 HBE1P02100 147 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 MMP9P14780 707 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 NDUFB7P17568 137 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 FOXG1P55316 489 aaPredicted RBP14.48□□□□□ -0.09
FOXA1-201ENST00000250448 CEACAM16Q2WEN9 425 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 NMSQ5H8A3 153 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 ZNF818PQ6ZRF7 136 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 ZNF611Q8N823 705 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 ZDHHC11Q9H8X9 412 aa14.48□□□□□ -0.09
FOXA1-201ENST00000250448 CHD8Q9HCK8 2581 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 CLEC18AA5D8T8 446 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 GLIPR1P48060 266 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 PSG4Q00888 419 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 TLE4Q04727 773 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SPNS3Q6ZMD2 512 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SLC25A26Q70HW3 274 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SLC35E3Q7Z769 313 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 GAPTQ8N292 157 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 CLEC18CQ8NCF0 446 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 CPT1CQ8TCG5 803 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 PFDN5Q99471 154 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 OPA3Q9H6K4 179 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 TRAV17A0A0B4J275 112 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SLC33A1O00400 549 aaPredicted RBP14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BKO60814 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 NXPH3O95157 252 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BJP06899 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BOP23527 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BBP33778 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 NPBWR2P48146 333 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BDP58876 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 RPL23AP62750 156 aaKnown RBP14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BCP62807 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 ID3Q02535 119 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 ZNF154Q13106 437 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SSX2Q16385 188 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST2H2BEQ16778 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.47□□□□□ -0.09
FOXA1-201ENST00000250448 CDPF1Q6NVV7 123 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 Q6ZS49 121 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 C5orf24Q7Z6I8 188 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 CMTM1Q8IZ96 169 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 PLPPR1Q8TBJ4 325 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BHQ93079 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 WDYHV1Q96HA8 205 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 TECTBQ96PL2 329 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 GPHA2Q96T91 129 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 ATP5SQ99766 215 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BNQ99877 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 HIST1H2BMQ99879 126 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 OR2H1Q9GZK4 316 aa14.47□□□□□ -0.09
FOXA1-201ENST00000250448 SEC14L6B5MCN3 397 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 MRPL33O75394 65 aaKnown RBP14.46□□□□□ -0.09
FOXA1-201ENST00000250448 TK1P04183 234 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 UCP1P25874 307 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 DPPA3Q6W0C5 159 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 ZNF383Q8NA42 475 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 NCOR2Q9Y618 2525 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 MED12LQ86YW9 2145 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 PTPRQQ9UMZ3 2332 aa14.46□□□□□ -0.09
FOXA1-201ENST00000250448 CYB5BO43169 146 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 CEACAM4O75871 244 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 VDAC1P21796 283 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 GNG10P50151 68 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 KHDC3LQ587J8 217 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 P4HA3Q7Z4N8 544 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 TAAR6Q96RI8 345 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 C12orf49Q9H741 205 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 Q9N2K0 584 aa14.46□□□□□ -0.1
FOXA1-201ENST00000250448 LOC102723971A0A1B0GUV8 181 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 IL24Q13007 206 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 FGFBP3Q8TAT2 258 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 HIPK2Q9H2X6 1198 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 IGKV1D-13A0A0B4J2D9 117 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 SLC22A20A6NK97 555 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 ZNF587BE7ETH6 402 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 CHST1O43916 411 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms