RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CXCL1P09341 107 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 FOLR2P14207 255 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 PAX6P26367 422 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 ATP6V0CP27449 155 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 RPL29P47914 159 aaKnown RBP8.62□□□□□ -1.03
COPB1-201ENST00000249923 PAX9P55771 341 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 FGF12P61328 243 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 PCBD1P61457 104 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 FAM210BQ96KR6 192 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 SYT3Q9BQG1 590 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 RNF115Q9Y4L5 304 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 KIAA1324LA8MWY0 1029 aaPredicted RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 ACP1P24666 158 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 PMELP40967 661 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 DCAF12Q5T6F0 453 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 OR2C3Q8N628 320 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 MRPL30Q8TCC3 161 aaKnown RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 POM121L2Q96KW2 1035 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 YPEL4Q96NS1 127 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 CNOT1A5YKK6 2376 aaKnown RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 ZNF732B4DXR9 585 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 MRPL33O75394 65 aaKnown RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 RHBDL1O75783 438 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 HOXA4Q00056 320 aaPredicted RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 TGFBR3Q03167 851 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 SSPNQ14714 243 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 HMGN3Q15651 99 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 CEACAM21Q3KPI0 293 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 C6orf15Q6UXA7 325 aaPredicted RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 NUFIP2Q7Z417 695 aaKnown RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 UBALD2Q8IYN6 164 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 Q8WTZ3 238 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 UBE2CO00762 179 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 TCAPO15273 167 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 CER1O95813 267 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 RND3P61587 244 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 NRN1LQ496H8 165 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 ZNF66Q6ZN08 573 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 Q6ZRM9 215 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 COMMD1Q8N668 190 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 OR1K1Q8NGR3 316 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 LYRM2Q9NU23 88 aaPredicted RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 METTL1Q9UBP6 276 aaKnown RBP8.61□□□□□ -1.03
COPB1-201ENST00000249923 PRR14LQ5THK1 2151 aa8.61□□□□□ -1.03
COPB1-201ENST00000249923 CLEC18AA5D8T8 446 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 HS3ST1O14792 307 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 TRGC1P0CF51 173 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
COPB1-201ENST00000249923 TMEM252Q8N6L7 170 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 CLEC18CQ8NCF0 446 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 RSG1Q9BU20 258 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 TTTY12Q9BZ98 90 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 IL17BQ9UHF5 180 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
COPB1-201ENST00000249923 IGKV1-39P01597 117 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 IGKV1D-39P04432 117 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
COPB1-201ENST00000249923 WDR86Q86TI4 376 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 RDH5Q92781 318 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 LINC00470Q9BZP3 86 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 MGAQ8IWI9 3026 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 IL18BPO95998 194 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 SERPINE2P07093 398 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 SOD3P08294 240 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 CD33P20138 364 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 AGAP20933 346 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 UCP1P25874 307 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 DDTP30046 118 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 DYNLT3P51808 116 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 ID3Q02535 119 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 HIKESHIQ53FT3 197 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 DBX2Q6ZNG2 339 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 TECTBQ96PL2 329 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 OR5B12Q96R08 314 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
COPB1-201ENST00000249923 PRSS50Q9UI38 385 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 ATMQ13315 3056 aa8.6□□□□□ -1.03
COPB1-201ENST00000249923 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 OR5H1A6NKK0 313 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 METTL15P1P0C7V9 234 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 DUSP3P51452 185 aaPredicted RBP8.59□□□□□ -1.03
COPB1-201ENST00000249923 ERVFRD-1P60508 538 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 PMS2P11Q13670 270 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 OR8G1Q15617 311 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 Q3ZCU0 254 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 SPINK9Q5DT21 86 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 SPANXN5Q5MJ07 72 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 ZNF324BQ6AW86 544 aaPredicted RBP8.59□□□□□ -1.03
COPB1-201ENST00000249923 ZDHHC23Q8IYP9 409 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM185AQ8N0U4 392 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 OR5P3Q8WZ94 311 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 OPA3Q9H6K4 179 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 ZNF665Q9H7R5 613 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 OR1A1Q9P1Q5 309 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 ATP23Q9Y6H3 246 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A10PA6NDY2 464 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms