RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 GALMQ96C23 342 aa19.55■□□□□ 0.72
SDF2L1-201ENST00000248958 CHCHD6Q9BRQ6 235 aa19.55■□□□□ 0.72
SDF2L1-201ENST00000248958 ZNF696Q9H7X3 374 aa19.55■□□□□ 0.72
SDF2L1-201ENST00000248958 OR2S2Q9NQN1 319 aa19.55■□□□□ 0.72
SDF2L1-201ENST00000248958 ABRACLQ9P1F3 81 aa19.55■□□□□ 0.72
SDF2L1-201ENST00000248958 LPLP06858 475 aa19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 ZNF816Q0VGE8 651 aaPredicted RBP19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 HMGN3Q15651 99 aa19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 ZNF880Q6PDB4 577 aa19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 PECRQ9BY49 303 aa19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 PRSS22Q9GZN4 317 aa19.54■□□□□ 0.72
SDF2L1-201ENST00000248958 METTL21EPA6NDL7 271 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 RGS11O94810 467 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 GAPDHP04406 335 aaKnown RBP19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 FAM106CPP0CH98 169 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 GADD45AP24522 165 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 LY6G6FQ5SQ64 297 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 SLC25A48Q6ZT89 311 aaKnown RBP19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 ZNF439Q8NDP4 499 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 CAPSLQ8WWF8 208 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 ARHGAP5-AS1Q96IT6 56 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 AK3Q9UIJ7 227 aa19.53■□□□□ 0.72
SDF2L1-201ENST00000248958 A0A1W2PPE3 182 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 FAM90A9PA6NNJ1 464 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 HSD17B6O14756 317 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 YPEL1O60688 119 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 MORN2Q502X0 79 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 NR2C2APQ86WQ0 139 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 Q8N2B8 174 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 CYYR1Q96J86 154 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 RBM14Q96PK6 669 aaKnown RBP19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 YPEL2Q96QA6 119 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 CITED1Q99966 193 aa19.52■□□□□ 0.72
SDF2L1-201ENST00000248958 TENM1Q9UKZ4 2725 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 LOC100506127A0A0U1RQW1 187 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 A0A1W2PPI3 338 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 TXNL1O43396 289 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 OR2F2O95006 317 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 EFNB2P52799 333 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 OR10V1Q8NGI7 309 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 OR10R2Q8NGX6 335 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 SETD6Q8TBK2 473 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 RAB3CQ96E17 227 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 CMSS1Q9BQ75 279 aaKnown RBP19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 C12orf4Q9NQ89 552 aa19.51■□□□□ 0.71
SDF2L1-201ENST00000248958 TIMM23O14925 209 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 SDC2P34741 201 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 ZNF137PP52743 207 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 MRPS15P82914 257 aaKnown RBP19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 ARL6IP1Q15041 203 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 SFXN4Q6P4A7 337 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 CFHR4Q92496 578 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 SLC25A33Q9BSK2 321 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 ZNF702PQ9H963 129 aa19.5■□□□□ 0.71
SDF2L1-201ENST00000248958 TRIM64CA6NLI5 447 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 M0QZK8 103 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 TMEM127O75204 238 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 SLC2A2P11168 524 aaPredicted RBP19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 CD24P25063 80 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 SCAND1P57086 179 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 PLA2G7Q13093 441 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 DIAPH2-AS1Q14236 149 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 HABP2Q14520 560 aaPredicted RBP19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 CT45A1Q5HYN5 189 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 PLAC9Q5JTB6 97 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 DRAM1Q8N682 238 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 OR52L2PQ8NGH6 319 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 CT45A3Q8NHU0 189 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 ST6GALNAC6Q969X2 333 aa19.49■□□□□ 0.71
SDF2L1-201ENST00000248958 NBEAL1Q6ZS30 2694 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 IGHV1-3A0A0C4DH29 117 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 SMIM30A4D0T7 59 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 RAB27BO00194 218 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 SCGNO76038 276 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 CD3GP09693 182 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 ZNF134P52741 427 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 FAM53AQ6NSI3 398 aaPredicted RBP19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 OR56B4Q8NH76 319 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 CENPOQ9BU64 300 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 ABHD14AQ9BUJ0 271 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 Q9N2K0 584 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 DAPK2Q9UIK4 370 aa19.48■□□□□ 0.71
SDF2L1-201ENST00000248958 A0A0B4J203 849 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 SERPINE3A8MV23 424 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 SLC31A2O15432 143 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 SNRNP70P08621 437 aaKnown RBP19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 HLA-DRB3P79483 266 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 MXD1Q05195 221 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 MOB3BQ86TA1 216 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 RTN4IP1Q8WWV3 396 aaPredicted RBP19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 IL1F10Q8WWZ1 152 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 YIPF6Q96EC8 236 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 ATG5Q9H1Y0 275 aa19.47■□□□□ 0.71
SDF2L1-201ENST00000248958 AIREO43918 545 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 PPP1CCP36873 323 aaKnown RBP19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 BLCAPP62952 87 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 HES1Q14469 280 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 GNMTQ14749 295 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 MOGAT2Q3SYC2 334 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 ARSJQ5FYB0 599 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms