RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ZIC3O60481 467 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ONECUT2O95948 504 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 LPAR6P43657 344 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF816Q0VGE8 651 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-201ENST00000248054 WDR73Q6P4I2 378 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF66Q6ZN08 573 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 PKIBQ9C010 78 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 Q9N2K0 584 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF71Q9NQZ8 489 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-201ENST00000248054 NAT8Q9UHE5 227 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 OR5H1A6NKK0 313 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 H3BP45 60 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 FGF12P61328 243 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 SSX7Q7RTT5 188 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 HSF4Q9ULV5 492 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 SPCS3P61009 180 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 HES1Q14469 280 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 DIRC2Q96SL1 478 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 KLK13Q9UKR3 277 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 PPYP01298 95 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 AQP3Q92482 292 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 TPPP3Q9BW30 176 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 UBE2CO00762 179 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 RHOBP62745 196 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 RNF7Q9UBF6 113 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
SIN3B-201ENST00000248054 M0R1X1 148 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CDIPTO14735 213 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF737O75373 536 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CSRP1P21291 193 aaKnown RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 ZNRF4Q8WWF5 429 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 NTF3P20783 257 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CDX1P47902 265 aaPredicted RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 UCP2P55851 309 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 ERVFC1-1P60608 527 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 AKIRIN1Q9H9L7 192 aaPredicted RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 J3QR89 54 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CCKARP32238 428 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 FZR1Q9UM11 496 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 PTBP3O95758 552 aaKnown RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 HLA-GP17693 338 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 OR3A1P47881 315 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 CDC34P49427 236 aaPredicted RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 GAMTQ14353 236 aa13.65□□□□□ -0.22
SIN3B-201ENST00000248054 LBHQ53QV2 105 aaPredicted RBP13.65□□□□□ -0.22
SIN3B-201ENST00000248054 ARHGEF17Q96PE2 2063 aaPredicted RBP13.65□□□□□ -0.23
SIN3B-201ENST00000248054 J3QRE1 110 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 ADAP1O75689 374 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 KRASP01116 189 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 DTD1Q8TEA8 209 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 VAMP8Q9BV40 100 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 HSBP1O75506 76 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 SPTBP11277 2137 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 P2RY4P51582 365 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 ETV3LQ6ZN32 361 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 OR2J1Q9GZK6 312 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 GAPDHP04406 335 aaKnown RBP13.64□□□□□ -0.23
SIN3B-201ENST00000248054 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 ASCL5Q7RTU5 278 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 SNX22Q96L94 193 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 RAB1BQ9H0U4 201 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 MS4A5Q9H3V2 200 aa13.64□□□□□ -0.23
SIN3B-201ENST00000248054 C5orf52A6NGY3 159 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 SYNGR2O43760 224 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 KLF7O75840 302 aaPredicted RBP13.63□□□□□ -0.23
SIN3B-201ENST00000248054 NHLH2Q02577 135 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 TMEM267Q0VDI3 215 aaPredicted RBP13.63□□□□□ -0.23
SIN3B-201ENST00000248054 SPOCK3Q9BQ16 436 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 OR2W1Q9Y3N9 320 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 HEATR5BQ9P2D3 2071 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 AGFG2O95081 481 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 SRSF3P84103 164 aaKnown RBP13.63□□□□□ -0.23
SIN3B-201ENST00000248054 HES7Q9BYE0 225 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 GPR61Q9BZJ8 451 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 FCGR3AP08637 254 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 MMP9P14780 707 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 ZNF708P17019 499 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 PRSS12P56730 875 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 VOPP1Q96AW1 172 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 TIMP4Q99727 224 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 MRPL13Q9BYD1 178 aaKnown RBP13.63□□□□□ -0.23
SIN3B-201ENST00000248054 WDR61Q9GZS3 305 aaKnown RBP13.63□□□□□ -0.23
SIN3B-201ENST00000248054 DOK5Q9P104 306 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 PSG11Q9UQ72 335 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 TMEM14DPA8MWL7 114 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 PMELP40967 661 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 UBE2V2Q15819 145 aa13.63□□□□□ -0.23
SIN3B-201ENST00000248054 OR10G4Q8NGN3 311 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms