RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 F8W036 122 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 HEXAP06865 529 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 OR3A1P47881 315 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 ID3Q02535 119 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 AKR1C1Q04828 323 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 AESQ08117 197 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 MST1LQ2TV78 715 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 KRBOX4Q5JUW0 171 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 TRAT1Q6PIZ9 186 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 LSM10Q969L4 123 aaKnown RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 A0A1B0GWJ7 208 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 ABCD4O14678 606 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 ATG12O94817 140 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 PTBP3O95758 552 aaKnown RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 PRH1P02810 166 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 SPP1P10451 314 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 CAMLGP49069 296 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 RPS23P62266 143 aaKnown RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 RPL23AP62750 156 aaKnown RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 COL10A1Q03692 680 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 ZNF645Q8N7E2 425 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 HSD17B11Q8NBQ5 300 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 BSCL2Q96G97 398 aaPredicted RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
DDX49-201ENST00000247003 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 WFDC1Q9HC57 220 aa12.73□□□□□ -0.37
DDX49-201ENST00000247003 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 C12orf77C9JDV5 145 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 TSPAN4O14817 238 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 GFRA3O60609 400 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 NXPH3O95157 252 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 TSPAN15O95858 294 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 CLINT1Q14677 625 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 STX12Q86Y82 276 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 RPRMLQ8N4K4 120 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 DRAM1Q8N682 238 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 OR10Z1Q8NGY1 313 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 INTS1Q8N201 2190 aaKnown RBP12.72□□□□□ -0.37
DDX49-201ENST00000247003 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 HBZP02008 142 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 OMGP23515 440 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 GLRXP35754 106 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 SELENOVP59797 346 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
DDX49-201ENST00000247003 CATR1Q13166 79 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 BTNL8Q6UX41 500 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 OR1L1Q8NH94 360 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 PPP1R35Q8TAP8 253 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 GPR146Q96CH1 333 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 OR2D2Q9H210 308 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 UQCC1Q9NVA1 299 aa12.72□□□□□ -0.37
DDX49-201ENST00000247003 K7EM74 188 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 PRRG2O14669 202 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 CHST1O43916 411 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 IGHV3-13P01766 116 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 DANCRP0C864 163 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 FAM90A1Q86YD7 464 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 COMMD1Q8N668 190 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 OR5C1Q8NGR4 320 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 COQ2Q96H96 371 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 SEC11CQ9BY50 192 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 TMEM231Q9H6L2 316 aa12.71□□□□□ -0.38
DDX49-201ENST00000247003 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
DDX49-201ENST00000247003 SPINT2O43291 252 aa12.7□□□□□ -0.38
DDX49-201ENST00000247003 CEACAM8P31997 349 aaPredicted RBP12.7□□□□□ -0.38
DDX49-201ENST00000247003 VHLLQ6RSH7 139 aa12.7□□□□□ -0.38
DDX49-201ENST00000247003 LURAP1Q96LR2 239 aa12.7□□□□□ -0.38
DDX49-201ENST00000247003 CACNG5Q9UF02 275 aa12.7□□□□□ -0.38
DDX49-201ENST00000247003 SRRM5B3KS81 715 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 MUC1P15941 1255 aaPredicted RBP12.69□□□□□ -0.38
DDX49-201ENST00000247003 BMP5P22003 454 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 PRDX2P32119 198 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 MSMO1Q15800 293 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 TMEM182Q6ZP80 229 aaPredicted RBP12.69□□□□□ -0.38
DDX49-201ENST00000247003 OR2V2Q96R30 315 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
DDX49-201ENST00000247003 SH3BGRL3Q9H299 93 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 C19orf12Q9NSK7 152 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 CARHSP1Q9Y2V2 147 aaKnown RBP12.69□□□□□ -0.38
DDX49-201ENST00000247003 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 ARID1AO14497 2285 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 ASPMQ8IZT6 3477 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 A0A0G2JRQ6 117 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 AGPAT2O15120 278 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 DFFBO76075 338 aa12.69□□□□□ -0.38
DDX49-201ENST00000247003 CST7O76096 145 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms