RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 COX5AP20674 150 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 KHDC3LQ587J8 217 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 CXorf66Q5JRM2 361 aaPredicted RBP8.03□□□□□ -1.12
COL21A1-201ENST00000244728 FAM166AQ6J272 317 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 DBX2Q6ZNG2 339 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 TPRX1Q8N7U7 411 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 RBMXL3Q8N7X1 1067 aaKnown RBP8.03□□□□□ -1.12
COL21A1-201ENST00000244728 CLDN23Q96B33 292 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 TXN2Q99757 166 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 NUDT16L1Q9BRJ7 211 aaKnown RBP8.03□□□□□ -1.12
COL21A1-201ENST00000244728 TTTY12Q9BZ98 90 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 THADAQ6YHU6 1953 aa8.03□□□□□ -1.12
COL21A1-201ENST00000244728 COL4A6Q14031 1691 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 PSG4Q00888 419 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 ZNF90Q03938 601 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 TOMM20LQ6UXN7 152 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 RTN4RL2Q86UN3 420 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 ZDHHC11Q9H8X9 412 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 PRSS50Q9UI38 385 aa8.02□□□□□ -1.12
COL21A1-201ENST00000244728 LRP5LA4QPB2 252 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 OR8U8P0C7N1 319 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 RFPL3SP0C7P2 107 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 TRGC1P0CF51 173 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 FAM157CP0CG43 387 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 RNF224P0DH78 156 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 LRRC29Q8WV35 223 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 TECTBQ96PL2 329 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 SF3B5Q9BWJ5 86 aaKnown RBP8.02□□□□□ -1.13
COL21A1-201ENST00000244728 OR2J1Q9GZK6 312 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 ZNF665Q9H7R5 613 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 GPR27Q9NS67 375 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 V9GYS6 101 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 PLXNB3Q9ULL4 1909 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 PITX3O75364 302 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 CRYABP02511 175 aaKnown RBP8.02□□□□□ -1.13
COL21A1-201ENST00000244728 CD5P06127 495 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 FGF5P12034 268 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 ZNF92Q03936 586 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 LIN7CQ9NUP9 197 aaKnown RBP8.02□□□□□ -1.13
COL21A1-201ENST00000244728 FUT9Q9Y231 359 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 TRAPPC1Q9Y5R8 145 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 CSPG4Q6UVK1 2322 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 C21orf140B9A014 251 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 SLC38A11Q08AI6 406 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
COL21A1-201ENST00000244728 LYG1Q8N1E2 194 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 MS4A10Q96PG2 267 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 UHRF2Q96PU4 802 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 S1PR3Q99500 378 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 RSG1Q9BU20 258 aa8.02□□□□□ -1.13
COL21A1-201ENST00000244728 TRBV6-7A0A0A0MS04 114 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PRD5 423 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PRF3 423 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PRM7 423 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 FCGR3BO75015 233 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 LRP11Q86VZ4 500 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 FAM103A1Q9BTL3 118 aaKnown RBP8.01□□□□□ -1.13
COL21A1-201ENST00000244728 IER2Q9BTL4 223 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 TAAR3PQ9P1P4 343 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 NAT8Q9UHE5 227 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 DNAH12Q6ZR08 3092 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 PIEZO2Q9H5I5 2752 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PNV4 684 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 LOC390937A0A1W2PQ73 354 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 TRAF3IP2O43734 574 aaPredicted RBP8.01□□□□□ -1.13
COL21A1-201ENST00000244728 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
COL21A1-201ENST00000244728 FTH1P19P0C7X4 201 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 HOXA5P20719 270 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 BCL3P20749 454 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 TMEM187Q14656 261 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 PCOLCEQ15113 449 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 OR2T10Q8NGZ9 312 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 IL22RA2Q969J5 263 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 TUBA4BQ9H853 241 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 VAX2Q9UIW0 290 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 F6UZH7 168 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 LDLRAD4O15165 306 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 SYNGR2O43760 224 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 APOA2P02652 100 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 SUPT4H1P63272 117 aaKnown RBP8.01□□□□□ -1.13
COL21A1-201ENST00000244728 CFHR1Q03591 330 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 FAM78BQ5VT40 261 aa8.01□□□□□ -1.13
COL21A1-201ENST00000244728 TMEM30CPA0ZSE6 113 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 B4E171 279 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
COL21A1-201ENST00000244728 CST2P09228 141 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 BCL2P10415 239 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 MGST1P10620 155 aaKnown RBP8□□□□□ -1.13
COL21A1-201ENST00000244728 TSPAN7P41732 249 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 FFAR4Q5NUL3 377 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 FAM27BQ5VT28 67 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 WDR25Q64LD2 544 aaPredicted RBP8□□□□□ -1.13
COL21A1-201ENST00000244728 BTNL3Q6UXE8 466 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 SLC35E3Q7Z769 313 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 MDP1Q86V88 176 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 SLC25A40Q8TBP6 338 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 GINS3Q9BRX5 216 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 ANGPTL4Q9BY76 406 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 COMMD5Q9GZQ3 224 aa8□□□□□ -1.13
COL21A1-201ENST00000244728 PARD6AQ9NPB6 346 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms