RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IGLL1P15814 213 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 DEFB134Q4QY38 66 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 TMEM52Q8NDY8 209 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 GATAD1Q8WUU5 269 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 RNF133Q8WVZ7 376 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 PNO1Q9NRX1 252 aaKnown RBP11.15□□□□□ -0.62
MSH2-201ENST00000233146 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 GPR75O95800 540 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 SMIM10L1P0DMW3 83 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 ZNF823P16415 610 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 ZNF83P51522 516 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.62
MSH2-201ENST00000233146 OR1K1Q8NGR3 316 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 SMIM10Q96HG1 83 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 ALG1L2C9J202 215 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 H0YJW9 148 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 CA2P00918 260 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 C1QTNF9P0C862 333 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 CRYBA4P53673 196 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 HLA-DRB5Q30154 266 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 FIGLAQ6QHK4 219 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 OR51E1Q8TCB6 317 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 ZNF524Q96C55 264 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 B3GALT2O43825 422 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 CD5LO43866 347 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
MSH2-201ENST00000233146 AZU1P20160 251 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 PEBP1P30086 187 aaKnown RBP11.14□□□□□ -0.63
MSH2-201ENST00000233146 IGFBP7Q16270 282 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 KLHL24Q6TFL4 600 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 FAM180AQ6UWF9 173 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 DGAT2L6Q6ZPD8 337 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 UEVLDQ8IX04 471 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 PILRBQ9UKJ0 227 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 RARRES3Q9UL19 164 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 MPPED1O15442 326 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 PMCHP20382 165 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 OPRM1P35372 400 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 RRADP55042 308 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 DPTQ07507 201 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 CRIP3Q6Q6R5 217 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 ZNF501Q96CX3 271 aaPredicted RBP11.14□□□□□ -0.63
MSH2-201ENST00000233146 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 HDAC8Q9BY41 377 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
MSH2-201ENST00000233146 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 RAB29O14966 203 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 MT-CO2P00403 227 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 IGKV1D-33P01593 117 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 IGKV1-33P01594 117 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 WASP42768 502 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 RELBQ01201 579 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 MUC21Q5SSG8 566 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 ZNF695Q8IW36 515 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 ST6GALNAC3Q8NDV1 305 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 OR10P1Q8NGE3 313 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 NT5CQ8TCD5 201 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 CLEC7AQ9BXN2 247 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 TXNIPQ9H3M7 391 aa11.14□□□□□ -0.63
MSH2-201ENST00000233146 NUDT3O95989 172 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 RAB9AP51151 201 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 RHOBP62745 196 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 TMEM267Q0VDI3 215 aaPredicted RBP11.13□□□□□ -0.63
MSH2-201ENST00000233146 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 GPR27Q9NS67 375 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 IGKV1-9A0A0C4DH69 117 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 TRAPPC2LH3BP13 241 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 M0R1X1 148 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 FCN1O00602 326 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 ZNF17P17021 662 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 SPSB1Q96BD6 273 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
MSH2-201ENST00000233146 WDR61Q9GZS3 305 aaKnown RBP11.13□□□□□ -0.63
MSH2-201ENST00000233146 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
MSH2-201ENST00000233146 SHANK1Q9Y566 2161 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 NXPH3O95157 252 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CELA3BP08861 270 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 SRD5A2P31213 254 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.12□□□□□ -0.63
MSH2-201ENST00000233146 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
MSH2-201ENST00000233146 GMPPAQ96IJ6 420 aaPredicted RBP11.12□□□□□ -0.63
MSH2-201ENST00000233146 TAAR3PQ9P1P4 343 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms