RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 C1QAP02745 245 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 HPXP02790 462 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 KIAA0040Q15053 153 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 FAM27BQ5VT28 67 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 SPRED2Q7Z698 418 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 PAXXQ9BUH6 204 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 TMEM191AQ9H0A3 160 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 DPH3P1Q9H4G8 78 aa9.18□□□□□ -0.94
TRPS1-201ENST00000220888 MBPP02686 304 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 HIST1H1BP16401 226 aaKnown RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CEACAM18A8MTB9 384 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CDC42EP2O14613 210 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CYB5R3P00387 301 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CRHP06850 196 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 FGF9P31371 208 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 HERPUD1Q15011 391 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 PCOLCEQ15113 449 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CD300LDQ6UXZ3 194 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 DNM1P46Q6ZS02 220 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 RNF133Q8WVZ7 376 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 YIPF6Q96EC8 236 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF318Q5VUA4 2279 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 HELTA6NFD8 242 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 APOBEC3AP31941 199 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 HCP5Q6MZN7 132 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 LNP1A1A4G5 178 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 P2RY1P47900 373 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 FOXL2P58012 376 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 PSG4Q00888 419 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CEACAM21Q3KPI0 293 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 CDCP2Q5VXM1 449 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 LIMS2Q7Z4I7 341 aa9.17□□□□□ -0.94
TRPS1-201ENST00000220888 C1orf162Q8NEQ5 155 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-201ENST00000220888 TRAV30A0A087WSZ9 112 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 TMEM189A5PLL7 270 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 CLEC7AQ9BXN2 247 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 NXF2Q9GZY0 626 aaKnown RBP9.16□□□□□ -0.94
TRPS1-201ENST00000220888 RPL8P62917 257 aaKnown RBP9.16□□□□□ -0.94
TRPS1-201ENST00000220888 TWIST1Q15672 202 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 PRSS8Q16651 343 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 ABHD12Q8N2K0 398 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 DNASE2BQ8WZ79 361 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 NRTNQ99748 197 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 MAP1LC3CQ9BXW4 147 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 IDI2-AS1Q9NZ38 188 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 SPAG17Q6Q759 2223 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 SRSF10O75494 262 aaKnown RBP9.16□□□□□ -0.94
TRPS1-201ENST00000220888 CXorf1O96002 111 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 HTN3P15516 51 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 OR1K1Q8NGR3 316 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 RALYQ9UKM9 306 aaKnown RBP9.16□□□□□ -0.94
TRPS1-201ENST00000220888 HS3ST3B1Q9Y662 390 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 MOSPD3O75425 235 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 HBZP02008 142 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 NRN1LQ496H8 165 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 BHLHA9Q7RTU4 235 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 PNKDQ8N490 385 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 RTN4RQ9BZR6 473 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 RAB33BQ9H082 229 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 SLC35B3Q9H1N7 401 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 LYRM2Q9NU23 88 aaPredicted RBP9.16□□□□□ -0.94
TRPS1-201ENST00000220888 RAXQ9Y2V3 346 aa9.16□□□□□ -0.94
TRPS1-201ENST00000220888 MPC2O95563 127 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 COMPP49747 757 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-201ENST00000220888 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 OR9G1Q8NH87 305 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-201ENST00000220888 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 SOSTQ9BQB4 213 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 LOC101059948A0A1B0GTJ6 334 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 MED19A0JLT2 244 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ISLRO14498 428 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF253O75346 499 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 RD3LP0DJH9 198 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 VSIG10L2P0DP72 767 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 PSG2P11465 335 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 OVCH2Q7RTZ1 564 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 SLC22A18ASQ8N1D0 253 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 LRRC75AQ8NAA5 344 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 FDCSPQ8NFU4 85 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ISG15P05161 165 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 NPPCP23582 126 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 RBM11P57052 281 aaKnown RBP9.15□□□□□ -0.94
TRPS1-201ENST00000220888 SELENOTP62341 195 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 BSXQ3C1V8 233 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 MMP26Q9NRE1 261 aa9.15□□□□□ -0.94
TRPS1-201ENST00000220888 ZMAT5Q9UDW3 170 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms