RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 HSPB2A8KAH6 182 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 MSTNO14793 375 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 IGFBP3P17936 291 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 DUSP3P51452 185 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 PAX2Q02962 417 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 HSPB2Q16082 182 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 C1orf100Q5SVJ3 147 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 SLC25A44Q96H78 314 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 BTF3L4Q96K17 158 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 NICN1Q9BSH3 213 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 OR51I2Q9H344 312 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 PILRBQ9UKJ0 227 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 OR7C2O60412 319 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 GABRA2P47869 451 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 RPL15P61313 204 aaKnown RBP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 IL13RA2Q14627 380 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 FDX2Q6P4F2 183 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 OR11L1Q8NGX0 322 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 RNF138Q8WVD3 245 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 ASB5Q8WWX0 329 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF586Q9NXT0 402 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 SLC22A13Q9Y226 551 aa11.72□□□□□ -0.53
GABPB1-201ENST00000220429 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF891A8MT65 544 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-201ENST00000220429 FAM166BA8MTA8 275 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 GNG7O60262 68 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 MTCP1P56278 107 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 SLC18B1Q6NT16 456 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 BHLHA15Q7RTS1 189 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-201ENST00000220429 CPEB2Q7Z5Q1 589 aaKnown RBP11.71□□□□□ -0.53
GABPB1-201ENST00000220429 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 PPP1R14AQ96A00 147 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 P2RX4Q99571 388 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF160Q9HCG1 818 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 OCIAD1Q9NX40 245 aa11.71□□□□□ -0.53
GABPB1-201ENST00000220429 COA3Q9Y2R0 106 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-201ENST00000220429 PHF3Q92576 2039 aaKnown RBP11.71□□□□□ -0.54
GABPB1-201ENST00000220429 A0A1W2PNV4 684 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 ODAMA1E959 279 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 ONECUT2O95948 504 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 FSTP19883 344 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 SFTPDP35247 375 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.54
GABPB1-201ENST00000220429 UNC119Q13432 240 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 FAM180AQ6UWF9 173 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 STXBP6Q8NFX7 210 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 PXMP4Q9Y6I8 212 aa11.71□□□□□ -0.54
GABPB1-201ENST00000220429 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 G3V4G9 280 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-201ENST00000220429 ROM1Q03395 351 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 ZP4Q12836 540 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 RTP5Q14D33 572 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 FAM69BQ5VUD6 431 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 C20orf196Q8IYI0 205 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 ASB10Q8WXI3 467 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 KLRF1Q9NZS2 232 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 IGHV2-26A0A0B4J1V2 119 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 OR6C6A6NF89 314 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 SDCBPO00560 298 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-201ENST00000220429 EFNA2O43921 213 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 PTGDSP41222 190 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 LCN2P80188 198 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 FMODQ06828 376 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 MSMO1Q15800 293 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 UBALD2Q8IYN6 164 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 OR10W1Q8NGF6 305 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 C11orf40Q8WZ69 217 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 PARLQ9H300 379 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 ANAPC10Q9UM13 185 aa11.7□□□□□ -0.54
GABPB1-201ENST00000220429 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-201ENST00000220429 GRIFINA4D1Z8 144 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 GJE1A6NN92 205 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 TNFSF15O95150 251 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 ESDP10768 282 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 MSR1P21757 451 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 KRTDAPP60985 99 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 RPL23P62829 140 aaKnown RBP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 KCNIP4Q6PIL6 250 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 H1FNTQ75WM6 255 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 Q8N976 141 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 OR10G3Q8NGC4 313 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 MAFAQ8NHW3 353 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 ANAPC16Q96DE5 110 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 GNPNAT1Q96EK6 184 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 WDYHV1Q96HA8 205 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 IGKV1D-43A0A0B4J1Z2 117 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms