RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C17orf78Q8N4C9 275 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 IL1F10Q8WWZ1 152 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 STRADBQ9C0K7 418 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 OR1A1Q9P1Q5 309 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 COL27A1Q8IZC6 1860 aaPredicted RBP11.29□□□□□ -0.6
SRP54-201ENST00000216774 FAM166BA8MTA8 275 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 LAMTOR5O43504 91 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 IGHV2-70P01814 119 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 CLN3Q13286 438 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 OR1C1Q15619 314 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 P2RX4Q99571 388 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 RSG1Q9BU20 258 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 SPRY4Q9C004 299 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 YIF1AO95070 293 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 CA6P23280 308 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 RAB11AP62491 216 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 HES7Q9BYE0 225 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 DOK5Q9P104 306 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 RHBDL1O75783 438 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 ZXDAP98168 799 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
SRP54-201ENST00000216774 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
SRP54-201ENST00000216774 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
SRP54-201ENST00000216774 RTL8AQ9BWD3 113 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
SRP54-201ENST00000216774 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 IFITM10A6NMD0 228 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 J3QW42 95 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 TGOLN2O43493 480 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 S100A2P29034 98 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 RND2P52198 227 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 NDUFA6P56556 154 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 ARL16Q0P5N6 197 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 ZNF726P1Q15940 193 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 ZNF585BQ52M93 769 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 OR2T2Q6IF00 324 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 OR1K1Q8NGR3 316 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
SRP54-201ENST00000216774 GPR87Q9BY21 358 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.61
SRP54-201ENST00000216774 OR14J1Q9UGF5 321 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 PPP1R3CQ9UQK1 317 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.61
SRP54-201ENST00000216774 ZFP92A6NM28 416 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 CYB5BO43169 146 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 IAPPP10997 89 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 TMEM41BQ5BJD5 291 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HAPLN4Q86UW8 402 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BHQ93079 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BNQ99877 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 HIST1H2BMQ99879 126 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 ZNF665Q9H7R5 613 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 TRAPPC2LQ9UL33 140 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 DMRT1Q9Y5R6 373 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 VPS13AQ96RL7 3174 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 DOCK10Q96BY6 2186 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 CLDN34H7C241 214 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 OR2H2O95918 312 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 IL18BPO95998 194 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 IFNA1P01562 189 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 JMJD7P0C870 316 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 LCN15Q6UWW0 184 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 CA5BP1Q8WTZ4 195 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms