RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ELP2Q6IA86 826 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 PXT1Q8NFP0 134 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 OR51A2Q8NGJ7 313 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 TNFAIP8L1Q8WVP5 186 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 TMEM106AQ96A25 262 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 RPEQ96AT9 228 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 CMTM3Q96MX0 182 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 GFI1Q99684 422 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 TAS2R4Q9NYW5 299 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 IDI2-AS1Q9NZ38 188 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 DAPK2Q9UIK4 370 aa11.92□□□□□ -0.5
UPK3A-201ENST00000216211 AK6Q9Y3D8 172 aaKnown RBP11.92□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FABP12A6NFH5 140 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 MAGEB3O15480 346 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 MPIG6BO95866 241 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 CD2P06729 351 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 GNG10P50151 68 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 DIAPH2-AS1Q14236 149 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 RSU1Q15404 277 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 RSBN1Q5VWQ0 802 aaPredicted RBP11.91□□□□□ -0.5
UPK3A-201ENST00000216211 ZNF529Q6P280 563 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 OR56B4Q8NH76 319 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 RFESDQ8TAC1 157 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 ORAI1Q96D31 301 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 SDHCQ99643 169 aaPredicted RBP11.91□□□□□ -0.5
UPK3A-201ENST00000216211 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 PSG11Q9UQ72 335 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 MOB4Q9Y3A3 225 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
UPK3A-201ENST00000216211 V9GY05 133 aa11.91□□□□□ -0.5
UPK3A-201ENST00000216211 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 M0QZK8 103 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 AIPO00170 330 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 HTR3BO95264 441 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 CD37P11049 281 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 SLC2A2P11168 524 aaPredicted RBP11.9□□□□□ -0.5
UPK3A-201ENST00000216211 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.5
UPK3A-201ENST00000216211 FSTP19883 344 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 SSTR5P35346 364 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 COL7A1Q02388 2944 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 HES1Q14469 280 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 ZNF79Q15937 498 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 OSR2Q8N2R0 312 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 DRAM1Q8N682 238 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 GDPD1Q8N9F7 314 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
UPK3A-201ENST00000216211 SRRQ9GZT4 340 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 PCDHB16Q9NRJ7 776 aa11.9□□□□□ -0.5
UPK3A-201ENST00000216211 TRAV8-7A0A075B6U6 113 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 A0A1W2PPE3 182 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 PSMB11A5LHX3 300 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 IFITM5A6NNB3 132 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 NPIPB11E5RHQ5 1161 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 TMEM11P17152 192 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 ELK1P19419 428 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 RGS21Q2M5E4 152 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 CNIH2Q6PI25 160 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 FAM131AQ6UXB0 335 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 RCC1LQ96I51 464 aaKnown RBP11.89□□□□□ -0.51
UPK3A-201ENST00000216211 LINC00574Q9H8X3 128 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 SPATA2Q9UM82 520 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 ING4Q9UNL4 249 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 ST3GAL6Q9Y274 331 aa11.89□□□□□ -0.51
UPK3A-201ENST00000216211 K7EIL1 84 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 APOA1P02647 267 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 SCAND1P57086 179 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 MADCAM1Q13477 382 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 HNF4GQ14541 408 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 Q6ZNX1 250 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 SUMF2Q8NBJ7 301 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 MINDY2Q8NBR6 621 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 Q8NFD4 153 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
UPK3A-201ENST00000216211 DPCDQ9BVM2 203 aaPredicted RBP11.88□□□□□ -0.51
UPK3A-201ENST00000216211 METTL9Q9H1A3 318 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms