RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF525Q8N782 197 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 Q8NFD4 153 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 PSMF1Q92530 271 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 PRDM14Q9GZV8 571 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 RBKSQ9H477 322 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 SDF2L1Q9HCN8 221 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 SYNGR2O43760 224 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 ADIRFQ15847 76 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 SPATA46Q5T0L3 261 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 OR8G2PQ6IF36 304 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 Q6ZS49 121 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
USH1C-201ENST00000005226 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 KCNE4Q8WWG9 221 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 CISD1Q9NZ45 108 aaKnown RBP11.93□□□□□ -0.5
USH1C-201ENST00000005226 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
USH1C-201ENST00000005226 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 CD300LBA8K4G0 201 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 PATE3B3GLJ2 98 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 YKT6O15498 198 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
USH1C-201ENST00000005226 FOLR3P41439 243 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 TESK1Q15569 626 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
USH1C-201ENST00000005226 HIST1H2BLQ99880 126 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 OPA3Q9H6K4 179 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 CACNA1DQ01668 2161 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
USH1C-201ENST00000005226 IGKV1D-33P01593 117 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 IGKV1-33P01594 117 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 IL11RAQ14626 422 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 RPUSD4Q96CM3 377 aaKnown RBP11.92□□□□□ -0.5
USH1C-201ENST00000005226 GAB2Q9UQC2 676 aa11.92□□□□□ -0.5
USH1C-201ENST00000005226 DUXBA0A1W2PPF3 345 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 PHOX2AO14813 284 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
USH1C-201ENST00000005226 WDR1O75083 606 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 DEFA4P12838 97 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
USH1C-201ENST00000005226 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 RTP5Q14D33 572 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 HES7Q9BYE0 225 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 DNPH1O43598 174 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 CYTIPO60759 359 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 IL2RGP31785 369 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
USH1C-201ENST00000005226 TECTBQ96PL2 329 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 HIST1H2AAQ96QV6 131 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 DLL3Q9NYJ7 618 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 PLA2G3Q9NZ20 509 aa11.91□□□□□ -0.5
USH1C-201ENST00000005226 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A18PA6NE21 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A16PA6NEW6 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A20PA6NIJ5 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A8PA6NJQ4 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A22PA8MWA6 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A12PA8MX19 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A5PA8MXJ8 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 SIRPB1O00241 398 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A15PP0C7V4 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A13PP0C7W8 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A14PP0C7W9 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 FAM90A24PP0C7X0 464 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 C3AR1Q16581 482 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 PRSS8Q16651 343 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 DMRTC2Q8IXT2 367 aaPredicted RBP11.9□□□□□ -0.5
USH1C-201ENST00000005226 OR5T1Q8NG75 326 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 OR10V1Q8NGI7 309 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
USH1C-201ENST00000005226 RNF150Q9ULK6 438 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 MUC3AQ02505 3323 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 MED12LQ86YW9 2145 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 ZNF737O75373 536 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 GZMHP20718 246 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 CA6P23280 308 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 RND2P52198 227 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 COL10A1Q03692 680 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.5
USH1C-201ENST00000005226 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms