RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Alkbh2Q6P6J4 239 aa18.07■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Agpat2Q8K3K7 278 aa18.07■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Mrpl39Q9JKF7 336 aa18.07■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Hebp2Q9WU63 205 aa18.07■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ighv1-34A0A075B5V2 117 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr455A0A0B4J1M2 317 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Zfp976E9Q981 636 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 CckarO08786 436 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Kcng3P59053 433 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr1132Q8VG97 308 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Taf9Q8VI33 264 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 TipinQ91WA1 278 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 DspE9Q557 2883 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Nsun4C4P6S0 806 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Vmn1r138D3YTY2 306 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8693E9PW18 306 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr417F8VQB1 309 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm4498K9J7G4 306 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Vmn1r118L7N273 306 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 AF067061O70616 171 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 H2-Ab1P01921 265 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gabra6P16305 453 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Bdh1Q80XN0 343 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Paqr7Q80ZE4 345 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 4921517D22RikQ8CET0 269 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr307Q8VFN8 313 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr1501Q8VFQ3 315 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gtf3aQ8VHT7 364 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 CmipQ9D486 773 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ndufb8Q9D6J5 186 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Znf593Q9DB42 134 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Tex101Q9JMI7 250 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Fzr1Q9R1K5 493 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Nprl2Q9WUE4 380 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Timm8a1Q9WVA2 97 aa18.06■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Dopey1Q8BL99 2399 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ighv7-1A0A075B5S2 121 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr152G3X9L8 316 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Btbd35f30J3QML3 498 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Btbd35f22J3QN64 498 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr1221L7MU53 311 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Zfp955bL7N232 545 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8857L7N291 182 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Bet1lO35153 111 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Amy1P00687 511 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 P20040 264 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Fam71f1Q3UZD7 341 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Pld6Q5SWZ9 221 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Lsm11Q8BUV6 361 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Vwc2Q8C8N3 324 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Cmtm4Q8CJ61 208 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Stac2Q8R1B0 408 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Bap18Q9DCT6 171 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 IckQ9JKV2 629 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Sema7aQ9QUR8 664 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Clec4dQ9Z2H6 219 aa18.05■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Prss47A0A0N4SVQ0 395 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Lyz2P08905 148 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Map2k4P47809 397 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Mrps21P58059 87 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Btg1P62325 171 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ppp1r14bQ62084 147 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Dpp10Q6NXK7 797 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr94Q6UAH0 386 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Mtch1Q791T5 389 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr91Q7TRL3 312 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Yipf6Q8BR70 236 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Q8R2K8 148 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Atp23Q9CWQ3 201 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 B3GNT2Q9Z222 397 aa18.04■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm7929A0A286YDV3 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Htra4A2RT60 483 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm21977F6U3N7 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8247F6VRJ8 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8005F6YKY3 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm3015F6ZAP6 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8212F6ZMY5 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm7954F7BAX1 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8138F7BY56 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8232F7CFJ3 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm17079F7D8Y4 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm20708H3BKF4 155 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8165L7N218 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm8122L7N2C7 213 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ascl4M0QW46 144 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm17078M0QW51 211 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Cd59aO55186 123 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Nxt2Q3UNA4 142 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Srek1ip1Q4V9W2 153 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gm11232Q5SPI8 295 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr181Q8VGQ7 317 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Zfp959Q91VM8 539 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Nkiras2Q9CR56 191 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Cst11Q9D269 139 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Zfyve26Q5DU37 2529 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Olfr936J3KMV2 267 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Gosr2O35166 212 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 GamtO35969 236 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Zfp11P10751 647 aa18.03■□□□□ 0.48
Ccdc88a-202ENSMUST00000109477 Ca6P18761 317 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms