RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Timp1P12032 205 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Pdcd6P12815 191 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rpl13aP19253 203 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 F7P70375 446 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Igfbp7Q61581 281 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr996Q7TRA0 314 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Klre1Q8CJC7 226 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lsm10Q8QZX5 122 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Trbv26A0A0B4J1P5 115 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nat8f7E0CYR6 227 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lrp3E9Q1T6 790 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm8660K7N6J2 305 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Hist1h1dP43277 221 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lcn12Q6JVL5 193 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Mogat2Q80W94 334 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 DynapQ9D7M5 161 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 I0C0044D17RikA6PWL3 169 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Sumo1P63166 101 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm10840Q3V2K9 103 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gins1Q9CZ15 196 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Atp6v1fQ9D1K2 119 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Arpc1bQ9WV32 372 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 FocadA2AKG8 1798 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 4930467E23RikD3Z1P8 350 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm15319E9Q637 350 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm14288E9Q9W0 88 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 CapgP24452 352 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ucp3P56501 308 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ndufb6Q3UIU2 128 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Plpp1Q61469 283 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm21119Q8C646 350 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Enpp5Q9EQG7 477 aa13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm9047B9EJX3 177 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Cd79bP15530 228 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 PdgfbP31240 241 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Atg4dQ8BGV9 474 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 YbeyQ8CAV0 164 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 PaplnQ9EPX2 1280 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm14325A2AW67 498 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zfp229E9PWT2 705 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nkpd1Q0VF94 599 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tox3Q80W03 575 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tctn1Q8BZ64 593 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Fahd1Q8R0F8 227 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 1700020A23RikQ9DA59 131 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Naa60Q9DBU2 242 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 P2ry4Q9JJS7 361 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r61W4VSP5 300 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1438-ps1A0A140LHS9 319 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r167G3UW71 315 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ier3P46694 153 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Masp1P98064 704 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Dtx4Q6PDK8 616 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Neil2Q6R2P8 329 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Flrt1Q6RKD8 674 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1465Q7TQR2 307 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Pld4Q8BG07 503 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Adprhl1Q8BGK2 353 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tmem11Q8BK08 190 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Barx1Q9ER42 254 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zfp979A2A799 407 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 GrprP21729 384 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr995Q8VF74 315 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr786Q8VFH8 312 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1294Q8VGE5 312 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr46Q8VGJ4 318 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ms4a6dQ99N07 247 aa13.17□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc35d1A2AKQ0 355 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Samd12Q0VE29 161 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 PtafrQ62035 341 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Pqlc2Q8C4N4 293 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 SpartQ8R1X6 671 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1431Q8VF59 312 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zfp930A0A1D5RM15 441 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Prrt2E9PUL5 346 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Cdk2ap1O35207 114 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ear3O35290 156 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lsm2O35900 95 aaKnown RBP13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 F13bQ07968 669 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Thap4Q6P3Z3 569 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Atpaf1Q811I0 324 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gtf2h5Q8K2X8 71 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Adam33Q923W9 797 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 9230112D13RikQ9D260 137 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slco5a1E9PVD9 850 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 RaxO35602 342 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 P01648 108 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 PtgfrP43117 366 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Smim7Q5RKS2 75 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Plppr5Q8BJ52 321 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1138Q8VFQ9 311 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr974Q8VH09 310 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Pdzd11Q9CZG9 140 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Clec6aQ9JKF4 209 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ecm29Q6PDI5 1840 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1274-psA0A1L1SQ02 309 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm4175D3YTW8 314 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r91E9PZR7 307 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r114L7N226 321 aa13.16□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r126L7N2C8 321 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms