RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 BC049730Q810N3 246 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tmem108Q8BHE4 574 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mr1Q8HWB0 341 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Prss42Q8VIF2 335 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mrpl41Q9CQN7 135 aaKnown RBP11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 PigcQ9CXR4 297 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 PipoxQ9D826 390 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Paqr4Q9JJE4 273 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Abca7Q91V24 2159 aa11.29□□□□□ -0.6
Clcn3-201ENSMUST00000004430 2610044O15Rik8A0A087WRJ1 410 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Zfp825A0A1Y7VK00 292 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm28051J3QMA2 81 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 P01795 144 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Grb2Q60631 217 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr1111Q7TR55 312 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 LmlnQ8BMN4 681 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 AfmidQ8K4H1 305 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr979Q8VH10 311 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mcts2Q9CQ21 181 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Lamtor5Q9D1L9 91 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr945Q9EQB5 319 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Snrnp200Q6P4T2 2136 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm13547A2ARC0 163 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm20834J3QM72 227 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Itln1O88310 313 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mst1P26928 716 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Pcbp4P57724 403 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tie1Q06806 1134 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Dhrs2Q149L0 282 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tmprss13Q5U405 543 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Kyat3Q71RI9 455 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Cpeb4Q7TN98 729 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr180Q7TS48 317 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Cd99l2Q8BIF0 237 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Sft2d2Q8VD57 159 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr1294Q8VGE5 312 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 DohhQ99LN9 302 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Hspb2Q99PR8 182 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Rab5aQ9CQD1 215 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mrpl18Q9CQL5 180 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Susd3Q9D176 269 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Spaca7Q9D2S4 182 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 4931429L15RikE9PVU2 379 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr750E9Q0Z1 331 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 IfnabL7MTU6 190 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Mdh2P08249 338 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Fgf8P37237 268 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tmem127Q8BGP5 238 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Hs3st3a1Q8BKN6 393 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 C030005K15RikQ8BQN9 115 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Rcc1lQ9CYF5 461 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gpx8Q9D7B7 209 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 SelenofQ9ERR7 162 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Phf3B2RQG2 2025 aaKnown RBP11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm2026A2ART4 498 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 4930444P10RikD3YUR1 185 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Zfp708F8VPP0 541 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr417F8VQB1 309 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 CideaO70302 217 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 TcapO70548 167 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gpr33O88416 339 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Best1O88870 551 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Scand1Q2M4I6 142 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr132Q7TRI8 313 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Pif1Q80SX8 650 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Depp1Q8K2F3 205 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Slc35e4Q8K3D6 351 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr1420Q8VF55 309 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr1138Q8VFQ9 311 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 NmbQ9CR53 121 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gnpnat1Q9JK38 184 aa11.28□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Dnajc13D4AFX7 2248 aaKnown RBP11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm21783J3QM57 227 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Gm21834J3QN05 151 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Nanos2P60322 136 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tmem217Q14AF1 189 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Cypt4Q6P925 153 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Igsf21Q7TNR6 468 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Lpar6Q8BMC0 344 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Tmem144Q8VEH0 348 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Olfr114Q923Q8 312 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 Stard4Q99JV5 224 aa11.27□□□□□ -0.6
Clcn3-201ENSMUST00000004430 NrasP08556 189 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Cd40P27512 289 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 PilrbQ2YFS2 224 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Olfr1173Q7TR24 312 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 PhyhiplQ8BGT8 375 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Osbpl11Q8CI95 751 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Defb7Q91V70 71 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 1700029F12RikQ9CRB4 147 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Prss22Q9ER10 306 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Mfap5Q9QZJ6 164 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Gm5890A0A140LI04 305 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Klk1b5P15945 261 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Cnr1P47746 473 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Rnf150Q5DTZ6 437 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Trp53rkaQ5U452 244 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 CebpeQ6PZD9 281 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Upk3bQ80YF6 275 aa11.27□□□□□ -0.61
Clcn3-201ENSMUST00000004430 Slc35e1Q8CD26 409 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms