RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 JkampQ8BI36 311 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Slc17a5Q8BN82 495 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Sco2Q8VCL2 255 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gjc3Q921C1 269 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 DohhQ99LN9 302 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Atg12Q9CQY1 141 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Mrps30Q9D0G0 442 aaKnown RBP16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 DnlzQ9D113 177 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Aurkaip1Q9DCJ7 200 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Adam11Q9R1V4 773 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Rab25Q9WTL2 213 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm11756A2BEJ1 356 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Prr19B2RW88 366 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 4931429L15RikE9PVU2 379 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Cbr1P48758 277 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Slc25a4P48962 298 aaKnown RBP16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Srp9P49962 86 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr331Q5NC44 324 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr324Q5NCC7 333 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Commd1Q8K4M5 188 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r178Q8R2B6 304 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Rfpl4aQ8VH31 287 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 MpiQ924M7 423 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Dnaja3Q99M87 480 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 GrinaQ9ESF4 345 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ssna1Q9JJ94 119 aa16.33■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Igkv12-89A0A0G2JGW8 112 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1157A2AVC4 312 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 P01658 132 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Anxa7Q07076 463 aaKnown RBP16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Opn5Q6VZZ7 377 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Sys1Q78S06 156 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Fam117aQ7TNF9 451 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Eddm3bQ8K0E4 149 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r89Q8R256 316 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r36Q8R2E3 305 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 UmodQ91X17 642 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ca15Q99N23 324 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 NubplQ9CWD8 319 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 EdarQ9R187 448 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Espl1P60330 2118 aa16.32■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 A0A286YD13 301 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Arxes1C0HK79 180 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Arxes2C0HK80 180 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Prr22F6TNE3 422 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm11009F7CWA7 138 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 P01746 140 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 MyogP12979 224 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 CryabP23927 175 aaKnown RBP16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Lsm5P62322 91 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1442Q0VEV7 312 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 MENTQ569E4 350 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Spata2lQ8BNN1 426 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Parp11Q8CFF0 331 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Lrrc25Q8K1T1 297 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r226Q8R2A8 298 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1377Q8VGH1 307 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Taf9Q8VI33 264 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr661Q99NH4 319 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Sapcd1Q9CY86 146 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Spsb1Q9D5L7 273 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ighv1-42A0A0A6YY38 117 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1532-ps1A0A0R4J8U2 307 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr707K7N662 307 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Prss39O70169 367 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Id4P41139 161 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r181Q0P547 304 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 UevldQ3U1V6 471 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Fam196aQ3USH1 422 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Phox2aQ62066 280 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Acer1Q8R4X1 273 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr50Q8VGK5 312 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1389Q8VGX0 311 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ddah2Q99LD8 285 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tmem33Q9CR67 247 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Defb5Q9EPV9 64 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 IckQ9JKV2 629 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Opn4Q9QXZ9 521 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Bex3Q9WTZ9 124 aa16.31■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Igkv6-14A0A140T8P1 115 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr248E9Q1L6 309 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr554E9Q546 317 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 P01795 144 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tdpoz1P0DMR5 365 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Cd8bP10300 213 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 UcnP81615 122 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Sat2Q6P8J2 170 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 NarflQ7TMW6 476 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr452Q7TRV8 317 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Fbll1Q80WS3 314 aaKnown RBP16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tmem267Q8VDR5 215 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr38Q8VGP4 317 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gins3Q9CY94 216 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Mrpl21Q9D1N9 209 aaKnown RBP16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Lyzl6Q9DA11 148 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 MioxQ9QXN5 285 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm17657E9PWY5 170 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gpr33O88416 339 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm11110Q3U4K9 109 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Foxf1Q61080 378 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 70.9 ms