RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ZNF835Q9Y2P0 537 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 PLXNA3P51805 1871 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 ZNF320A2RRD8 509 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 SULT1A1P50225 295 aa15.2■□□□□ 0.02
SCARB2-223ENST00000640640 RBFOX3A6NFN3 312 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CLDN34H7C241 214 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CD200P41217 278 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 H2BFSP57053 126 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 NR2C2APQ86WQ0 139 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 HSD17B10Q99714 261 aaKnown RBP15.19■□□□□ 0.02
SCARB2-223ENST00000640640 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 ZNF737O75373 536 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CLN5O75503 358 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 PPP1CCP36873 323 aaKnown RBP15.19■□□□□ 0.02
SCARB2-223ENST00000640640 PRR27Q6MZM9 219 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 OR1K1Q8NGR3 316 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 Q96M66 194 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 ZNF665Q9H7R5 613 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 RCC2Q9P258 522 aaKnown RBP15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A10PA6NDY2 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A18PA6NE21 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A16PA6NEW6 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A20PA6NIJ5 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A8PA6NJQ4 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A7PA6NKC0 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A22PA8MWA6 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A12PA8MX19 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A5PA8MXJ8 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A23PA8MXZ1 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CLEC3BP05452 202 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A15PP0C7V4 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A13PP0C7W8 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A14PP0C7W9 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM90A24PP0C7X0 464 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 P2RY4P51582 365 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CFHR1Q03591 330 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 TLE1Q04724 770 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 STPG2Q8N412 459 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 FAM24BQ8N5W8 94 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 TMEM54Q969K7 222 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 GINS3Q9BRX5 216 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 CTDSP1Q9GZU7 261 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 LIPGQ9Y5X9 500 aa15.19■□□□□ 0.02
SCARB2-223ENST00000640640 DUXBA0A1W2PPF3 345 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 G3V3Q6 166 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 ZIC3O60481 467 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 C1orf174Q8IYL3 243 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 OPN3Q9H1Y3 402 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-223ENST00000640640 C20orf202A1L168 122 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 MBPP02686 304 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-223ENST00000640640 SEC11BP0C7V7 166 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 COX5BP10606 129 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 FABP9Q0Z7S8 132 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 TIPARPQ7Z3E1 657 aaKnown RBP15.18■□□□□ 0.02
SCARB2-223ENST00000640640 RAB1CQ92928 201 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 FAM117AQ9C073 453 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 OR5AC2Q9NZP5 309 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 NCBP2LA6PVI3 153 aaKnown RBP15.18■□□□□ 0.02
SCARB2-223ENST00000640640 DVL1O14640 695 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 S100A8P05109 93 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 NMBP08949 121 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 NQO2P16083 231 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 HLA-GP17693 338 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 PRDX2P32119 198 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 IFITM2Q01629 132 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 TMEM241Q24JQ0 296 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 FNDC7Q5VTL7 733 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 G6PCP35575 357 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 CNN1P51911 297 aaKnown RBP15.18■□□□□ 0.02
SCARB2-223ENST00000640640 PRRX1P54821 245 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 NAAAQ02083 359 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 C19orf57Q0VDD7 668 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 VSTM2AQ8TAG5 236 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 SIGLEC12Q96PQ1 595 aa15.18■□□□□ 0.02
SCARB2-223ENST00000640640 WNT2BQ93097 391 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 NUDT16L1Q9BRJ7 211 aaKnown RBP15.17■□□□□ 0.02
SCARB2-223ENST00000640640 IGHV3OR15-7A0A075B7D8 119 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 LOC390937A0A1W2PQ73 354 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 NPIPB7O75200 414 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 CD74P04233 296 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 RPS2P15880 293 aaKnown RBP15.17■□□□□ 0.02
SCARB2-223ENST00000640640 RHOBP62745 196 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 SCGB2A2Q13296 93 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 RAB1BQ9H0U4 201 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 WIPI2Q9Y4P8 454 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 ZNF826PQ6ZT77 177 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 MESP1Q9BRJ9 268 aa15.17■□□□□ 0.02
SCARB2-223ENST00000640640 CFDP00746 253 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-223ENST00000640640 CCL8P80075 99 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 EFNB1P98172 346 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 NHLH2Q02577 135 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 Q5BKY6 102 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 PHYHD1Q5SRE7 291 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 SHISA5Q8N114 240 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 MISP3Q96FF7 219 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 C5orf66Q9H5L9 145 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 A0A1W2PN81 502 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 OR2H2O95918 312 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 UMODP07911 640 aa15.16■□□□□ 0.02
SCARB2-223ENST00000640640 CHRNA7P36544 502 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms