RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MSNP26038 577 aaKnown RBP1.54□□□□□ -2.16
CCDC7-216ENST00000640058 S100A5P33763 92 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 XRCC4Q13426 336 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 COTL1Q14019 142 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 RBM48Q5RL73 367 aaKnown RBP1.54□□□□□ -2.16
CCDC7-216ENST00000640058 C10orf91Q5T1B1 145 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 SSX7Q7RTT5 188 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 FAM9CQ8IZT9 166 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 SYCE1Q8N0S2 351 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 OR4A5Q8NH83 315 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 DTD1Q8TEA8 209 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 OR5P3Q8WZ94 311 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 FBXL15Q9H469 300 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 PARVGQ9HBI0 331 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 EMC3Q9P0I2 261 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 ATP6V1DQ9Y5K8 247 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 GMEB1Q9Y692 573 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 TMEM94Q12767 1356 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 RAB3GAP2Q9H2M9 1393 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 F8VZ95 297 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 J3QLI3 93 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 SYNGR1O43759 233 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 UGT2B11O75310 529 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 SYT1P21579 422 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 CRABP2P29373 138 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 CBX5P45973 191 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 RAB25P57735 213 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 MRPS15P82914 257 aaKnown RBP1.53□□□□□ -2.16
CCDC7-216ENST00000640058 FAM3AP98173 230 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 ANGPT1Q15389 498 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 MAP3K19Q56UN5 1328 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 PDPK2PQ6A1A2 396 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 CLEC6AQ6EIG7 209 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 C8orf74Q6P047 294 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 HS3ST5Q8IZT8 346 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 DDI1Q8WTU0 396 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 GTF2H4Q92759 462 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 CCDC127Q96BQ5 260 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 C8orf76Q96K31 380 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 HIGD2AQ9BW72 106 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 ARL6Q9H0F7 186 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 CENPHQ9H3R5 247 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 METTL17Q9H7H0 456 aaPredicted RBP1.53□□□□□ -2.16
CCDC7-216ENST00000640058 ZNF286AQ9HBT8 521 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
CCDC7-216ENST00000640058 MYO5BQ9ULV0 1848 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 PTPRKQ15262 1439 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 GPR171O14626 319 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 PHYHO14832 338 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 SULT1B1O43704 296 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 SCN2BO60939 215 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 TNFAIP8O95379 198 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 ZNF22P17026 224 aaPredicted RBP1.52□□□□□ -2.17
CCDC7-216ENST00000640058 RAB2AP61019 212 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 BASP1P80723 227 aaKnown RBP1.52□□□□□ -2.17
CCDC7-216ENST00000640058 SLAMF1Q13291 335 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 PAFAH1B3Q15102 231 aaKnown RBP1.52□□□□□ -2.17
CCDC7-216ENST00000640058 DNAAF3Q8N9W5 541 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 PSTPIP2Q9H939 334 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 NRBP2Q9NSY0 501 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 MS4A12Q9NXJ0 267 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 SLC23A2Q9UGH3 650 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 CD300AQ9UGN4 299 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 ATPIF1Q9UII2 106 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 PRELID1Q9Y255 219 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 C15orf41Q9Y2V0 281 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 MTCH2Q9Y6C9 303 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 CACNA1SQ13698 1873 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 ATAD5Q96QE3 1844 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 SHANK3Q9BYB0 1731 aa1.52□□□□□ -2.17
CCDC7-216ENST00000640058 MPDZO75970 2070 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 MYO3BQ8WXR4 1341 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 IGKV1-12A0A0C4DH73 117 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 GOLGA6L19H0YKK7 550 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 DENRO43583 198 aaKnown RBP1.51□□□□□ -2.17
CCDC7-216ENST00000640058 SNAP29O95721 258 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 IGKV1D-12P01611 117 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 GYPCP04921 128 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 GUSBP08236 651 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 ATF1P18846 271 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 S100A2P29034 98 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 KDELR2P33947 212 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 HSPA13P48723 471 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 DR1Q01658 176 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR8G1Q15617 311 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 TIMM23BQ5SRD1 257 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 VN1R4Q7Z5H5 301 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 SELENOHQ8IZQ5 122 aaKnown RBP1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR11G2Q8NGC1 345 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR10D4PQ8NGN7 298 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR9I1Q8NGQ6 314 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR11L1Q8NGX0 322 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 ANGPTL6Q8NI99 470 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 DYNC2LI1Q8TCX1 351 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 RNASEH2CQ8TDP1 164 aaKnown RBP1.51□□□□□ -2.17
CCDC7-216ENST00000640058 CCDC12Q8WUD4 166 aaPredicted RBP1.51□□□□□ -2.17
CCDC7-216ENST00000640058 OR8B2Q96RD0 313 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 MED10Q9BTT4 135 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 UGT2B28Q9BY64 529 aa1.51□□□□□ -2.17
CCDC7-216ENST00000640058 PHLDA3Q9Y5J5 127 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms