RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 IFI44Q8TCB0 444 aa18.4■□□□□ 0.54
CLN5-215ENST00000636767 TRAPPC2LH3BP13 241 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 TRAPPC6AO75865 159 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 PSG2P11465 335 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 CCL2P13500 99 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 ZNF324BQ6AW86 544 aaPredicted RBP18.39■□□□□ 0.53
CLN5-215ENST00000636767 RAB40CQ96S21 281 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 SYNGR1O43759 233 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 SLC25A6P12236 298 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 ZFP36L1Q07352 338 aaKnown RBP18.39■□□□□ 0.53
CLN5-215ENST00000636767 PNRC1Q12796 327 aaPredicted RBP18.39■□□□□ 0.53
CLN5-215ENST00000636767 Q6ZRM9 215 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 SSX7Q7RTT5 188 aa18.39■□□□□ 0.53
CLN5-215ENST00000636767 CYB5R3P00387 301 aaPredicted RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 HIST1H1BP16401 226 aaKnown RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 LCN15Q6UWW0 184 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 PRDM6Q9NQX0 595 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 TMEM242Q9NWH2 141 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 NOSIPQ9Y314 301 aaKnown RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 OR2W1Q9Y3N9 320 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 TNRC6AQ8NDV7 1962 aaKnown RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 CNOT4O95628 575 aaKnown RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 SERPINE2P07093 398 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 GPX4P36969 197 aaPredicted RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 HLA-BQ31612 363 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 MRPL21Q7Z2W9 205 aaKnown RBP18.38■□□□□ 0.53
CLN5-215ENST00000636767 CA5BP1Q8WTZ4 195 aa18.38■□□□□ 0.53
CLN5-215ENST00000636767 CLDN34H7C241 214 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 JMJD7P0C870 316 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 CXCL12P48061 93 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 FGF8P55075 233 aaPredicted RBP18.37■□□□□ 0.53
CLN5-215ENST00000636767 ARF1P84077 181 aaKnown RBP18.37■□□□□ 0.53
CLN5-215ENST00000636767 ARL16Q0P5N6 197 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 NRN1LQ496H8 165 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 C9orf135Q5VTT2 229 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 MKXQ8IYA7 352 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 MBD3L1Q8WWY6 194 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 DEPPQ9NTK1 212 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 A0A096LPE4 126 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 A0A1W2PPZ6 126 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 OR5H1A6NKK0 313 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 PHOX2AO14813 284 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 PTBP3O95758 552 aaKnown RBP18.37■□□□□ 0.53
CLN5-215ENST00000636767 IGKV1-39P01597 117 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 IGKV1D-39P04432 117 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 S100GP29377 79 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 FOLR3P41439 243 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 DEFA6Q01524 100 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 ZNF525Q8N782 197 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 SCGB1C1Q8TD33 95 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 TMEM45BQ96B21 275 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 CLDN23Q96B33 292 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 ZNF488Q96MN9 340 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 SSX3Q99909 188 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 ZNF552Q9H707 407 aaPredicted RBP18.37■□□□□ 0.53
CLN5-215ENST00000636767 SDF2L1Q9HCN8 221 aa18.37■□□□□ 0.53
CLN5-215ENST00000636767 C5orf49A4QMS7 147 aa18.36■□□□□ 0.53
CLN5-215ENST00000636767 IAPPP10997 89 aa18.36■□□□□ 0.53
CLN5-215ENST00000636767 RNASE11Q8TAA1 199 aaKnown RBP18.36■□□□□ 0.53
CLN5-215ENST00000636767 GTF3AQ92664 365 aaKnown RBP18.36■□□□□ 0.53
CLN5-215ENST00000636767 RCC1LQ96I51 464 aaKnown RBP18.36■□□□□ 0.53
CLN5-215ENST00000636767 RIMS4Q9H426 269 aaPredicted RBP18.36■□□□□ 0.53
CLN5-215ENST00000636767 GFOD1Q9NXC2 390 aa18.36■□□□□ 0.53
CLN5-215ENST00000636767 CACNG5Q9UF02 275 aa18.36■□□□□ 0.53
CLN5-215ENST00000636767 OR14J1Q9UGF5 321 aa18.36■□□□□ 0.53
CLN5-215ENST00000636767 ERRFI1Q9UJM3 462 aaPredicted RBP18.36■□□□□ 0.53
CLN5-215ENST00000636767 METTL15P1P0C7V9 234 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 SPINK2P20155 84 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 Q0VFX4 171 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 HAPLN4Q86UW8 402 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 OR10J5Q8NHC4 309 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 ZNF407Q9C0G0 2248 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 TRBV6-6A0A0A6YYG2 114 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 LY86O95711 162 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 FABP4P15090 132 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 RDH5Q92781 318 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 PSMG3Q9BT73 122 aaPredicted RBP18.35■□□□□ 0.53
CLN5-215ENST00000636767 PRRG4Q9BZD6 226 aa18.35■□□□□ 0.53
CLN5-215ENST00000636767 PINLYPA6NC86 204 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 ZNF503-AS2A6NEH8 195 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 C3orf80F5H4A9 247 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 HS3ST1O14792 307 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 SYNGR2O43760 224 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 GDF1P27539 372 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 C4orf17Q53FE4 359 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 ZNF880Q6PDB4 577 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 PSMF1Q92530 271 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 CABLES2Q9BTV7 478 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 LRFN1Q9P244 771 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 TRAV24A0A0B4J272 114 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 MRPL33O75394 65 aaKnown RBP18.34■□□□□ 0.53
CLN5-215ENST00000636767 GFRA1P56159 465 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 C17orf78Q8N4C9 275 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
CLN5-215ENST00000636767 PSENENQ9NZ42 101 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 OR1A1Q9P1Q5 309 aa18.34■□□□□ 0.53
CLN5-215ENST00000636767 TRBV24-1A0A075B6N3 115 aa18.33■□□□□ 0.53
CLN5-215ENST00000636767 TGOLN2O43493 480 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms