RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FOXJ2Q9P0K8 574 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 LAMTOR5O43504 91 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 CELA3BP08861 270 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 ARL16Q0P5N6 197 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 CEACAM21Q3KPI0 293 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 ABHD17BQ5VST6 288 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 SPIN2AQ99865 258 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 SPIN2BQ9BPZ2 258 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 UBE2CO00762 179 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 PITX3O75364 302 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 NEURL1O76050 574 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 C9orf152Q5JTZ5 239 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 RIPPLY2Q5TAB7 128 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF808Q8N4W9 903 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 APH1AQ96BI3 265 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 EGLN1Q9GZT9 426 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 TMPRSS5Q9H3S3 457 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 GRPP07492 148 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 MMP9P14780 707 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 F2RP25116 425 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 RAB5CP51148 216 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 ICAM4Q14773 271 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 SSX7Q7RTT5 188 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 GCNT2Q8N0V5 402 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 IL36GQ9NZH8 169 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
CACNA1A-228ENST00000636610 SCAF4O95104 1147 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 SYNGR4O95473 234 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 WNT5AP41221 380 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 LHX2P50458 406 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 CTAG1AP78358 180 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 OR1C1Q15619 314 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 STX12Q86Y82 276 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 CCDC54Q8NEL0 328 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 PRDM14Q9GZV8 571 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 RPRMQ9NS64 109 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 TRAPPC2LQ9UL33 140 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 AP4M1O00189 453 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 DEGS1O15121 323 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 TRGC2P03986 189 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 FOLR2P14207 255 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 ID3Q02535 119 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 PLP2Q04941 152 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF880Q6PDB4 577 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 SPNS3Q6ZMD2 512 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 FAM58AQ8N1B3 248 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 TPRX1Q8N7U7 411 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 OR5T1Q8NG75 326 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 IL17BQ9UHF5 180 aa11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 BOKQ9UMX3 212 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-228ENST00000636610 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KIAA1324LA8MWY0 1029 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 CDIPTO14735 213 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 MT-CO3P00414 261 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 UCP1P25874 307 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 CLDN18P56856 261 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 RHEBQ15382 184 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 LTC4SQ16873 150 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 FAM209BQ5JX69 171 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 SSX3Q99909 188 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 NIPSNAP3BQ9BS92 247 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 TTTY12Q9BZ98 90 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 DLL3Q9NYJ7 618 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 DMXL2Q8TDJ6 3036 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KIR2DS1A0A191URI9 304 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 IGHV3-7P01780 117 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 SERPINA7P05543 415 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 CD55P08174 381 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KIR2DS4P43632 304 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 DUSP3P51452 185 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 UCP2P55851 309 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KRTAP27-1Q3LI81 207 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 TMEM251Q8N6I4 163 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 FZR1Q9UM11 496 aa11.93□□□□□ -0.5
CACNA1A-228ENST00000636610 KRASP01116 189 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 IFNA5P01569 189 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 SRPXP78539 464 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 ZNF295-AS1Q8N0V1 137 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
CACNA1A-228ENST00000636610 MUCL1Q96DR8 90 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms