RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CDH26Q8IXH8 852 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 PRR18Q8N4B5 295 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 C8orf31Q8N9H6 132 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 OR2T10Q8NGZ9 312 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 RCC1LQ96I51 464 aaKnown RBP14.23□□□□□ -0.13
PNKP-225ENST00000636214 DERL3Q96Q80 235 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 SELENOIQ9C0D9 397 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 PSORS1C1Q9UIG5 152 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 PEX16Q9Y5Y5 336 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 IGHV3-72A0A0B4J1Y9 119 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A10PA6NDY2 464 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A7PA6NKC0 464 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 NUDT19A8MXV4 375 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A23PA8MXZ1 464 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 C15orf65H3BRN8 121 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 TXNL1O43396 289 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 DUS4LO95620 317 aaKnown RBP14.22□□□□□ -0.13
PNKP-225ENST00000636214 MT-ND4P03905 459 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 IGLL1P15814 213 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 MGMTP16455 207 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 LOXL3P58215 753 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 C10orf99Q6UWK7 81 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 ZNF329Q86UD4 541 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 ZNF485Q8NCK3 441 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 WFDC9Q8NEX5 89 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 OR4K15Q8NH41 348 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 DPF1Q92782 380 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 GPR61Q9BZJ8 451 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 CST11Q9H112 138 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 BANF2Q9H503 90 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 KCNIP1Q9NZI2 227 aa14.22□□□□□ -0.13
PNKP-225ENST00000636214 RCC2Q9P258 522 aaKnown RBP14.22□□□□□ -0.13
PNKP-225ENST00000636214 CA11O75493 328 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 CD1AP06126 327 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 GNAO1P09471 354 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 FUT3P21217 361 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 GPR50Q13585 617 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 FOXB2Q5VYV0 432 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 Q6ZPA2 131 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 IZUMO1Q8IYV9 350 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 COMMD1Q8N668 190 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 UQCC2Q9BRT2 126 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 PLCXD1Q9NUJ7 323 aa14.21□□□□□ -0.13
PNKP-225ENST00000636214 AURKAIP1Q9NWT8 199 aaPredicted RBP14.21□□□□□ -0.13
PNKP-225ENST00000636214 C12orf77C9JDV5 145 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 CD1BP29016 333 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 OGFRL1Q5TC84 451 aaPredicted RBP14.2□□□□□ -0.14
PNKP-225ENST00000636214 TGIF2LXQ8IUE1 241 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 RTN4IP1Q8WWV3 396 aaPredicted RBP14.2□□□□□ -0.14
PNKP-225ENST00000636214 TFAP2CQ92754 450 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 EAF1Q96JC9 268 aaPredicted RBP14.2□□□□□ -0.14
PNKP-225ENST00000636214 NOL4LQ96MY1 436 aaPredicted RBP14.2□□□□□ -0.14
PNKP-225ENST00000636214 RASL11BQ9BPW5 248 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 MND1Q9BWT6 205 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 GHRLQ9UBU3 117 aa14.2□□□□□ -0.14
PNKP-225ENST00000636214 AP4M1O00189 453 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 MOSP00540 346 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 HBZP02008 142 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 GLAP06280 429 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 UBBP0CG47 229 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 SLC6A1P30531 599 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 RPL23AP62750 156 aaKnown RBP14.19□□□□□ -0.14
PNKP-225ENST00000636214 GABPB1Q06547 395 aaPredicted RBP14.19□□□□□ -0.14
PNKP-225ENST00000636214 EBI3Q14213 229 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 NKAPLQ5M9Q1 402 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 GLT8D1Q68CQ7 371 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 MS4A15Q8N5U1 240 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 NANOGP1Q8N7R0 232 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 FAM46BQ96A09 425 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 Q96M66 194 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 NEDD4LQ96PU5 975 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 GON7Q9BXV9 100 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 ZFP57Q9NU63 452 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 LIN7CQ9NUP9 197 aaKnown RBP14.19□□□□□ -0.14
PNKP-225ENST00000636214 SCN3BQ9NY72 215 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 LINC00527Q9UJ94 153 aa14.19□□□□□ -0.14
PNKP-225ENST00000636214 UBE2QL1A1L167 161 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 CASQ2O14958 399 aaPredicted RBP14.18□□□□□ -0.14
PNKP-225ENST00000636214 RRP9O43818 475 aaKnown RBP14.18□□□□□ -0.14
PNKP-225ENST00000636214 PDCD6O75340 191 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 MPIG6BO95866 241 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 IGHG2P01859 326 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 RBM48Q5RL73 367 aaKnown RBP14.18□□□□□ -0.14
PNKP-225ENST00000636214 SLC25A48Q6ZT89 311 aaKnown RBP14.18□□□□□ -0.14
PNKP-225ENST00000636214 STPG2Q8N412 459 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 TMEM104Q8NE00 496 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 KLHL30-AS1Q8NEE0 82 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 OR8H1Q8NGG4 311 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 OR1L1Q8NH94 360 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 OR2S2Q9NQN1 319 aa14.18□□□□□ -0.14
PNKP-225ENST00000636214 RGS11O94810 467 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 GPR12P47775 334 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 TEX38Q6PEX7 206 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 OR2W3Q7Z3T1 314 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 FBLIM1Q8WUP2 373 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 MCRIP2Q9BUT9 160 aaKnown RBP14.17□□□□□ -0.14
PNKP-225ENST00000636214 TMED9Q9BVK6 235 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 TAF9BQ9HBM6 251 aa14.17□□□□□ -0.14
PNKP-225ENST00000636214 PTGES3LE9PB15 166 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms