RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 IGKV1D-33P01593 117 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 IGKV1-33P01594 117 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 PF4P02776 101 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 GLAP06280 429 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 UBBP0CG47 229 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 FUT3P21217 361 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 HNF4GQ14541 408 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 BEAN1Q3B7T3 259 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 RNLSQ5VYX0 342 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 GLT8D1Q68CQ7 371 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 OR4K15Q8NH41 348 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 KCNIP1Q9NZI2 227 aa15.09■□□□□ 0.01
CLN6-213ENST00000636212 IGHV3-43A0A0B4J1X8 118 aa15.08■□□□□ 0
CLN6-213ENST00000636212 IGHV1-3A0A0C4DH29 117 aa15.08■□□□□ 0
CLN6-213ENST00000636212 PSMB11A5LHX3 300 aa15.08■□□□□ 0
CLN6-213ENST00000636212 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
CLN6-213ENST00000636212 AMY1AP04745 511 aa15.08■□□□□ 0
CLN6-213ENST00000636212 AMY2AP04746 511 aa15.08■□□□□ 0
CLN6-213ENST00000636212 IGHV3-43DP0DP04 118 aa15.08■□□□□ 0
CLN6-213ENST00000636212 DIAPH2-AS1Q14236 149 aa15.08■□□□□ 0
CLN6-213ENST00000636212 MED22Q15528 200 aa15.08■□□□□ 0
CLN6-213ENST00000636212 ACSM3Q53FZ2 586 aa15.08■□□□□ 0
CLN6-213ENST00000636212 C6orf141Q5SZD1 244 aa15.08■□□□□ 0
CLN6-213ENST00000636212 REC114Q7Z4M0 266 aa15.08■□□□□ 0
CLN6-213ENST00000636212 PRR18Q8N4B5 295 aa15.08■□□□□ 0
CLN6-213ENST00000636212 UBALD1Q8TB05 177 aa15.08■□□□□ 0
CLN6-213ENST00000636212 CHPT1Q8WUD6 406 aa15.08■□□□□ 0
CLN6-213ENST00000636212 TMED9Q9BVK6 235 aa15.08■□□□□ 0
CLN6-213ENST00000636212 VCX3BQ9H321 246 aa15.08■□□□□ 0
CLN6-213ENST00000636212 TPRKBQ9Y3C4 175 aa15.08■□□□□ 0
CLN6-213ENST00000636212 UBE2QL1A1L167 161 aa15.07■□□□□ 0
CLN6-213ENST00000636212 PIN1P1O15428 100 aa15.07■□□□□ 0
CLN6-213ENST00000636212 TXNL1O43396 289 aa15.07■□□□□ 0
CLN6-213ENST00000636212 REG1BP48304 166 aa15.07■□□□□ 0
CLN6-213ENST00000636212 SLC35B1P78383 322 aa15.07■□□□□ 0
CLN6-213ENST00000636212 SPHARQ15513 63 aa15.07■□□□□ 0
CLN6-213ENST00000636212 FBLN7Q53RD9 439 aa15.07■□□□□ 0
CLN6-213ENST00000636212 RBM48Q5RL73 367 aaKnown RBP15.07■□□□□ 0
CLN6-213ENST00000636212 KPRPQ5T749 579 aaPredicted RBP15.07■□□□□ 0
CLN6-213ENST00000636212 OR2T10Q8NGZ9 312 aa15.07■□□□□ 0
CLN6-213ENST00000636212 NRG4Q8WWG1 115 aa15.07■□□□□ 0
CLN6-213ENST00000636212 SGCDQ92629 289 aa15.07■□□□□ 0
CLN6-213ENST00000636212 Q96M66 194 aa15.07■□□□□ 0
CLN6-213ENST00000636212 NCBP2LA6PVI3 153 aaKnown RBP15.06■□□□□ 0
CLN6-213ENST00000636212 SERPINE3A8MV23 424 aa15.06■□□□□ 0
CLN6-213ENST00000636212 C12orf77C9JDV5 145 aa15.06■□□□□ 0
CLN6-213ENST00000636212 PDCD6O75340 191 aa15.06■□□□□ 0
CLN6-213ENST00000636212 LOXL3P58215 753 aa15.06■□□□□ 0
CLN6-213ENST00000636212 FOXRED2Q8IWF2 684 aa15.06■□□□□ 0
CLN6-213ENST00000636212 C5orf56Q8N8D9 126 aa15.06■□□□□ 0
CLN6-213ENST00000636212 TMEM104Q8NE00 496 aa15.06■□□□□ 0
CLN6-213ENST00000636212 PHYHIPQ92561 330 aa15.06■□□□□ 0
CLN6-213ENST00000636212 FAM46BQ96A09 425 aa15.06■□□□□ 0
CLN6-213ENST00000636212 NEDD4LQ96PU5 975 aa15.06■□□□□ 0
CLN6-213ENST00000636212 SC5DO75845 299 aa15.05■□□□□ -0
CLN6-213ENST00000636212 ATP6V1G2O95670 118 aa15.05■□□□□ -0
CLN6-213ENST00000636212 MPIG6BO95866 241 aa15.05■□□□□ -0
CLN6-213ENST00000636212 HBZP02008 142 aa15.05■□□□□ -0
CLN6-213ENST00000636212 CD1BP29016 333 aa15.05■□□□□ -0
CLN6-213ENST00000636212 EBI3Q14213 229 aa15.05■□□□□ -0
CLN6-213ENST00000636212 HSD17B12Q53GQ0 312 aa15.05■□□□□ -0
CLN6-213ENST00000636212 OXLD1Q5BKU9 147 aa15.05■□□□□ -0
CLN6-213ENST00000636212 NKAPLQ5M9Q1 402 aa15.05■□□□□ -0
CLN6-213ENST00000636212 UNQ9370/PRO34162Q6UXP9 181 aa15.05■□□□□ -0
CLN6-213ENST00000636212 SLC35E3Q7Z769 313 aa15.05■□□□□ -0
CLN6-213ENST00000636212 ZNF554Q86TJ5 538 aa15.05■□□□□ -0
CLN6-213ENST00000636212 TGIF2LXQ8IUE1 241 aa15.05■□□□□ -0
CLN6-213ENST00000636212 IZUMO1Q8IYV9 350 aa15.05■□□□□ -0
CLN6-213ENST00000636212 RTN4IP1Q8WWV3 396 aaPredicted RBP15.05■□□□□ -0
CLN6-213ENST00000636212 UFD1Q92890 307 aa15.05■□□□□ -0
CLN6-213ENST00000636212 IGHV3-72A0A0B4J1Y9 119 aa15.04■□□□□ -0
CLN6-213ENST00000636212 AQP4P55087 323 aa15.04■□□□□ -0
CLN6-213ENST00000636212 SLC35A2P78381 396 aa15.04■□□□□ -0
CLN6-213ENST00000636212 SLC25A48Q6ZT89 311 aaKnown RBP15.04■□□□□ -0
CLN6-213ENST00000636212 CEACAM19Q7Z692 300 aa15.04■□□□□ -0
CLN6-213ENST00000636212 LYPD6Q86Y78 171 aa15.04■□□□□ -0
CLN6-213ENST00000636212 GAPTQ8N292 157 aa15.04■□□□□ -0
CLN6-213ENST00000636212 OR51D1Q8NGF3 324 aa15.04■□□□□ -0
CLN6-213ENST00000636212 OR10V1Q8NGI7 309 aa15.04■□□□□ -0
CLN6-213ENST00000636212 EAF1Q96JC9 268 aaPredicted RBP15.04■□□□□ -0
CLN6-213ENST00000636212 TMEM59Q9BXS4 323 aa15.04■□□□□ -0
CLN6-213ENST00000636212 TAF9BQ9HBM6 251 aa15.04■□□□□ -0
CLN6-213ENST00000636212 OR2S2Q9NQN1 319 aa15.04■□□□□ -0
CLN6-213ENST00000636212 PLXNB1O43157 2135 aa15.03■□□□□ -0
CLN6-213ENST00000636212 RGS11O94810 467 aa15.03■□□□□ -0
CLN6-213ENST00000636212 MOSP00540 346 aa15.03■□□□□ -0
CLN6-213ENST00000636212 RCC1P18754 421 aaPredicted RBP15.03■□□□□ -0
CLN6-213ENST00000636212 SRMP19623 302 aa15.03■□□□□ -0
CLN6-213ENST00000636212 TCTEX1D4Q5JR98 221 aa15.03■□□□□ -0
CLN6-213ENST00000636212 STEAP3Q658P3 488 aa15.03■□□□□ -0
CLN6-213ENST00000636212 COMMD1Q8N668 190 aa15.03■□□□□ -0
CLN6-213ENST00000636212 OR8H1Q8NGG4 311 aa15.03■□□□□ -0
CLN6-213ENST00000636212 OR1L1Q8NH94 360 aa15.03■□□□□ -0
CLN6-213ENST00000636212 KCNG3Q8TAE7 436 aa15.03■□□□□ -0
CLN6-213ENST00000636212 RASL11BQ9BPW5 248 aa15.03■□□□□ -0
CLN6-213ENST00000636212 GON7Q9BXV9 100 aa15.03■□□□□ -0
CLN6-213ENST00000636212 LIN7CQ9NUP9 197 aaKnown RBP15.03■□□□□ -0
CLN6-213ENST00000636212 NECAP2Q9NVZ3 263 aa15.03■□□□□ -0
CLN6-213ENST00000636212 ABRACLQ9P1F3 81 aa15.03■□□□□ -0
CLN6-213ENST00000636212 RRP15Q9Y3B9 282 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms