RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF845Q96IR2 970 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM68Q96MH6 324 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 RARRES3Q9UL19 164 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 TCAPO15273 167 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 SYNGR2O43760 224 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF737O75373 536 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 KBTBD11O94819 623 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 TIAF1O95411 115 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 C16orf82Q7Z2V1 217 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 GPHA2Q96T91 129 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 NEU1Q99519 415 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 UNC13CQ8NB66 2214 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 RTTNQ86VV8 2226 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 A0A0J9YW62 118 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM250H0YL14 139 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 H7BYZ3 331 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 ZIC3O60481 467 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 METTL15P1P0C7V9 234 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 FGF8P55075 233 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 OR51G1Q8NGK1 321 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM170AQ8WVE7 144 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM18Q96B42 140 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 VSIRQ9H7M9 311 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 ADAMTS20P59510 1910 aa12.67□□□□□ -0.38
CACNA1A-220ENST00000635988 TNFSF11O14788 317 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 B4GALT1P15291 398 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 CCKARP32238 428 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 GALR1P47211 349 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 RAC3P60763 192 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 ACOT6Q3I5F7 207 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF66Q6ZN08 573 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 NEK7Q8TDX7 302 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 DDA1Q9BW61 102 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 WNT5BQ9H1J7 359 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 RBKSQ9H477 322 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 PSENENQ9NZ42 101 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 TNFSF12O43508 249 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 JMJD7P0C870 316 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 MDKP21741 143 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 ANAPC16Q96DE5 110 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 FOXB1Q99853 325 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 OR2W1Q9Y3N9 320 aa12.66□□□□□ -0.38
CACNA1A-220ENST00000635988 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 CYTIPO60759 359 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 SFTPCP11686 197 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 MYF5P13349 255 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 BCL3P20749 454 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 HNF4GQ14541 408 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 LHX4Q969G2 390 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 WDR61Q9GZS3 305 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 PRDM14Q9GZV8 571 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 PLK3Q9H4B4 646 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 TIMM9Q9Y5J7 89 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 HRASP01112 189 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 SSX7Q7RTT5 188 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 AAED1Q7RTV5 226 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 C17orf78Q8N4C9 275 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 C1QTNF5Q9BXJ0 243 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 SRXN1Q9BYN0 137 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 MRPL37Q9BZE1 423 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 XIRP2A4UGR9 3374 aa12.65□□□□□ -0.38
CACNA1A-220ENST00000635988 PATE4P0C8F1 98 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 TUBG1P23258 451 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 PSMB3P49720 205 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 SHHQ15465 462 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 C5orf24Q7Z6I8 188 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 CACNG5Q9UF02 275 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 TRBV6-6A0A0A6YYG2 114 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 CBR3O75828 277 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 CD55P08174 381 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 NUBP1P53384 320 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 LINC00596Q86U02 117 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 MKXQ8IYA7 352 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 OR10J5Q8NHC4 309 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 ADGRG7Q96K78 797 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 OR51I2Q9H344 312 aa12.64□□□□□ -0.39
CACNA1A-220ENST00000635988 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms