RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SPAG7O75391 227 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 RP2O75695 350 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CRHP06850 196 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CD37P11049 281 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLC25A16P16260 332 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 DEKP35659 375 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 TALDO1P37837 337 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ZNF140P52738 457 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CDKN2DP55273 166 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 RAP1AP62834 184 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SKP1P63208 163 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLC35B1P78383 322 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 C2orf54Q08AI8 447 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 C6orf183Q5T699 404 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 TSPO2Q5TGU0 170 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 C16orf87Q6PH81 154 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ASCL4Q6XD76 172 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 PID1Q7Z2X4 250 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 OR4K2Q8NGD2 314 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 OR6N2Q8NGY6 317 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 PIFOQ8TCI5 191 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 OLFM3Q96PB7 478 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 VAT1Q99536 393 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 HSD17B10Q99714 261 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 EBNA1BP2Q99848 306 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CHAC1Q9BUX1 264 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLC25A39Q9BZJ4 359 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLIRPQ9GZT3 109 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 TMEM27Q9HBJ8 222 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 TREX1Q9NSU2 369 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ZMAT5Q9UDW3 170 aaKnown RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CES1P1Q9UKY3 287 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 BOKQ9UMX3 212 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ATP6V1DQ9Y5K8 247 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 ARL5AQ9Y689 179 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLC22A7Q9Y694 548 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 SCN3AQ9NY46 2000 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
TRAPPC9-216ENST00000634178 CADP27708 2225 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 IGKV1-8A0A0C4DH67 115 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 A0A0G2JMM0 328 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 A0A0J9YXV3 536 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 A0A1W2PPB8 328 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 A0A1W2PRS3 328 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 RAB19A4D1S5 217 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 KIR3DP1A8MWS1 328 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 PANO1I0J062 215 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 M0QX08 132 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 UBFD1O14562 309 aaKnown RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 RFXANKO14593 260 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 GATCO43716 136 aaKnown RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 SHOX2O60902 331 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 UPK1BO75841 260 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 OR56A5P0C7T3 313 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 IGHV1-8P0DP01 117 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 PSG2P11465 335 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 MDKP21741 143 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 PSMB5P28074 263 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CD79BP40259 229 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 PRDX1Q06830 199 aaKnown RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CKAP4Q07065 602 aaKnown RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 ST3GAL4Q11206 333 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 SLAQ13239 276 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 THOC7Q6I9Y2 204 aaKnown RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 OPN5Q6U736 354 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 NKAIN4Q8IVV8 208 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 WDR31Q8NA23 367 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 NDNFQ8TB73 568 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 NAT14Q8WUY8 206 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 TSLPQ969D9 159 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CENPNQ96H22 339 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CAPZA3Q96KX2 299 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 UQCC2Q9BRT2 126 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 MED18Q9BUE0 208 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 TPK1Q9H3S4 243 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 ANKHQ9HCJ1 492 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CHMP5Q9NZZ3 219 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 CFL2Q9Y281 166 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 WSB1Q9Y6I7 421 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 NINQ8N4C6 2090 aa3.31□□□□□ -1.88
TRAPPC9-216ENST00000634178 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 IGHV1-69DA0A0B4J2H0 117 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 A0A1W2PP18 115 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 PRMT5O14744 637 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 TAAR5O14804 337 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 GMDSO60547 372 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 OR2J2O76002 312 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 OXTP01178 125 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 GCGP01275 180 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 C1QAP02745 245 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 BGNP21810 368 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 HTR2CP28335 458 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 UGT2B10P36537 528 aa3.3□□□□□ -1.88
TRAPPC9-216ENST00000634178 CPTPQ5TA50 214 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms