RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PLEKHA3Q9HB20 300 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ELL3Q9HB65 397 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 PLSCR3Q9NRY6 295 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 RBFOX1Q9NWB1 397 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 IDI2-AS1Q9NZ38 188 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM216Q9P0N5 145 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TNFSF18Q9UNG2 199 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 EXOSC1Q9Y3B2 195 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 AP4S1Q9Y587 144 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF780BQ9Y6R6 833 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 KIF25-AS1Q9Y6Z4 181 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 EPRSP07814 1512 aaKnown RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ARHGAP23Q9P227 1491 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 GON4LQ3T8J9 2241 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TRAV36DV7A0A075B6V5 113 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 A0A087WX48 190 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 A0A0J9YY10 115 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 A0A1B0GTH9 108 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 A0A1B0GX78 115 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR5H15A6NDH6 313 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CEACAM18A8MTB9 384 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 FOXI3A8MTJ6 420 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 IDSB3KWA1 339 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 M0R2Z0 102 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 HCRTR1O43613 425 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PIAS1O75925 651 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 KBTBD11O94819 623 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CDRT1O95170 752 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CD8AP01732 235 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 HBZP02008 142 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OPN1SWP03999 348 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SEMG1P04279 462 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PAEPP09466 180 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 HLA-EP13747 358 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CD99P14209 185 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CRHBPP24387 322 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 MYL9P24844 172 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 NPY1RP25929 384 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ARL2P36404 184 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 GABRA2P47869 451 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR1D4P47884 311 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 DEFA1P59665 94 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 DEFA3P59666 94 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 RPL27P61353 136 aaKnown RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 HSPE1P61604 102 aaKnown RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 RUNX1Q01196 453 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 MXD1Q05195 221 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 RAB40BQ12829 278 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 GGTLC2Q14390 218 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 UBE2V2Q15819 145 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SSX1Q16384 188 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CLEC12BQ2HXU8 276 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 IAH1Q2TAA2 248 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 NHLRC3Q5JS37 347 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 LEG1Q6P5S2 330 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 GTF2H5Q6ZYL4 71 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF584Q8IVC4 421 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TCTE3Q8IZS6 198 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR8I2Q8N0Y5 310 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TCTEX1D1Q8N7M0 179 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PRELID2Q8N945 189 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 RELL2Q8NC24 303 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF740Q8NDX6 193 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR4K17Q8NGC6 315 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR5A2Q8NGI9 324 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR51A2Q8NGJ7 313 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR5W2Q8NH69 310 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 MFSD8Q8NHS3 518 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 LCN9Q8WX39 176 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SLC7A6Q92536 515 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 APOBEC3DQ96AK3 386 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PPCDCQ96CD2 204 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 DDIT4LQ96D03 193 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PCED1BQ96HM7 432 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SMIM8Q96KF7 97 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR2M4Q96R27 311 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 APOOQ9BUR5 198 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TMEM59Q9BXS4 323 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 EBPLQ9BY08 206 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SLC17A9Q9BYT1 436 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SLC25A39Q9BZJ4 359 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 OR2J1Q9GZK6 312 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 C20orf85Q9H1P6 137 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 FBXL15Q9H469 300 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SAR1AQ9NR31 198 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TNFRSF19Q9NS68 423 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 FAM49BQ9NUQ9 324 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 TAS2R16Q9NYV7 291 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 SCML2Q9UQR0 700 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ST3GAL6Q9Y274 331 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 HDGFL3Q9Y3E1 203 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 PCYT1BQ9Y5K3 369 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
CNOT1-223ENST00000628857 ADAMTSL3P82987 1691 aa2.28□□□□□ -2.05
CNOT1-223ENST00000628857 ZCCHC11Q5TAX3 1644 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms