RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 HKR1P10072 659 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 TESK1Q15569 626 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 HMGN3Q15651 99 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 LILRB1Q8NHL6 650 aaPredicted RBP16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 PIGMQ9H3S5 423 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 DNAJB11Q9UBS4 358 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 CD200P41217 278 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 SELENOHQ8IZQ5 122 aaKnown RBP16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 OR10V1Q8NGI7 309 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 COQ2Q96H96 371 aa16.51■□□□□ 0.23
CHRNA4-209ENST00000627000 PCNX1Q96RV3 2341 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 NKX2-6A6NCS4 301 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 NPIPB11E5RHQ5 1161 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 K7EPK0 472 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 HSPA12AO43301 675 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 SPRY3O43610 288 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 CD40P25942 277 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 COL10A1Q03692 680 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 PXDC1Q5TGL8 231 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 CMTM1Q8IZ96 169 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 FAM71E2Q8N5Q1 922 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 CD177Q8N6Q3 437 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TMEM56Q96MV1 263 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 OR2V2Q96R30 315 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 REG4Q9BYZ8 158 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 MRPL37Q9BZE1 423 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 ZC4H2Q9NQZ6 224 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TMED3Q9Y3Q3 217 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TMEM56-RWDD3S4R434 201 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 ICE1Q9Y2F5 2266 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TMEM30CPA0ZSE6 113 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 KRBOX1C9JBD0 128 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 ATF4P18848 351 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 OR3A1P47881 315 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TMPRSS3P57727 454 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 SMCO1Q147U7 214 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 SMIM21Q3B7S5 101 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 FAM53AQ6NSI3 398 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 ZNF695Q8IW36 515 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 PDZD9Q8IXQ8 264 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 TPRX1Q8N7U7 411 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 BOLLQ8N9W6 283 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 PRR7Q8TB68 274 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 SHARPINQ9H0F6 387 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 PFDN2Q9UHV9 154 aa16.5■□□□□ 0.23
CHRNA4-209ENST00000627000 IGLV3-9A0A075B6K5 115 aa16.49■□□□□ 0.23
CHRNA4-209ENST00000627000 IGLV2-14P01704 120 aa16.49■□□□□ 0.23
CHRNA4-209ENST00000627000 MZT1Q08AG7 82 aa16.49■□□□□ 0.23
CHRNA4-209ENST00000627000 SNTB1Q13884 538 aaKnown RBP16.49■□□□□ 0.23
CHRNA4-209ENST00000627000 OR1L1Q8NH94 360 aa16.49■□□□□ 0.23
CHRNA4-209ENST00000627000 MEX3AA1L020 520 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 C16orf97H3BN30 126 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 CDS2O95674 445 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 UCP1P25874 307 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 RPL12P30050 165 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 SRPXP78539 464 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 SLC35E4Q6ICL7 350 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 BVESQ8NE79 360 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 STOML3Q8TAV4 291 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 PHYHIPLQ96FC7 376 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 MEGF10Q96KG7 1140 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 SLC25A32Q9H2D1 315 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 SDHAF2Q9NX18 166 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 C12orf77C9JDV5 145 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 HEXAP06865 529 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 CEACAM6P40199 344 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 GABRA2P47869 451 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 WFDC8Q8IUA0 241 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 OR51H1Q8NH63 302 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 OR2S2Q9NQN1 319 aa16.48■□□□□ 0.23
CHRNA4-209ENST00000627000 SRRM5B3KS81 715 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 PSG2P11465 335 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 TPT1P13693 172 aaKnown RBP16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 F2RP25116 425 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 GLIPR1P48060 266 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 CLEC9AQ6UXN8 241 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 GCSAMQ8N6F7 178 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 OR4D5Q8NGN0 318 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 ITLN1Q8WWA0 313 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 PLCE1Q9P212 2302 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 IGF2RP11717 2491 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 IGHV3OR15-7A0A075B7D8 119 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 A0A1B0GW55 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 MFSD2BA6NFX1 497 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 H0Y980 276 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 OR8U9P0C7N5 309 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L2P0CJ85 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L3P0CJ86 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L4P0CJ87 422 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L5P0CJ88 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L6P0CJ89 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4L7P0CJ90 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 BAP18Q8IXM2 172 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 OR8U1Q8NH10 309 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 MRGPRDQ8TDS7 321 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 KCNIP1Q9NZI2 227 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 DUX4Q9UBX2 424 aa16.47■□□□□ 0.23
CHRNA4-209ENST00000627000 ZDHHC8Q9ULC8 765 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms