RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 CD27P26842 260 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 EIF3IQ13347 325 aaKnown RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 OR10S1Q8NGN2 331 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ARHGEF17Q96PE2 2063 aaPredicted RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 PPP1CCP36873 323 aaKnown RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 TEX29Q8N6K0 151 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 MPC1Q9Y5U8 109 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 LILRA5A6NI73 299 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 DHRS7CA6NNS2 312 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 H0Y980 276 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PRKNO60260 465 aaPredicted RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 MELTFP08582 738 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 SMIM17P0DL12 118 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 STXBP6Q8NFX7 210 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 SPPL3Q8TCT6 385 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 COX14Q96I36 57 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 HSD17B10Q99714 261 aaKnown RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 CHST5Q9GZS9 411 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 DNAJC4Q9NNZ3 241 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PAPPA2Q9BXP8 1791 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 KBTBD11O94819 623 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 HOXC4P09017 264 aaPredicted RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 MPLP40238 635 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 SPACA9Q96E40 222 aaPredicted RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 COA4Q9NYJ1 87 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 SBF1O95248 1867 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 A0A096LPE4 126 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 A0A1W2PPZ6 126 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 C1QL1O75973 258 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 IL2RAP01589 272 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 TNFRSF9Q07011 255 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 FNDC7Q5VTL7 733 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 VN1R4Q7Z5H5 301 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ZCCHC14Q8WYQ9 949 aaKnown RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 TMEM230Q96A57 120 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 R3HDM4Q96D70 268 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 VSTM2LQ96N03 204 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 TMEM222Q9H0R3 208 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 CLDN16Q9Y5I7 305 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 MYO7AQ13402 2215 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 A6NJY4 79 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ACTL6AO96019 429 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 OPRK1P41145 380 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ROM1Q03395 351 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PARM1Q6UWI2 310 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ERASQ7Z444 233 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 UBALD2Q8IYN6 164 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 OR4S2Q8NH73 311 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PARLQ9H300 379 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 NRG2O14511 850 aaPredicted RBP7.81□□□□□ -1.16
VCL-206ENST00000623461 PIN1P1O15428 100 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 CA11O75493 328 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 FCGR3AP08637 254 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PNLIPP16233 465 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 RUNX1Q01196 453 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 PATE1Q8WXA2 126 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 UPK3AO75631 287 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 CSN3P07498 182 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 CARFQ8N187 725 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 ZNF519Q8TB69 540 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 SFTPCP11686 197 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 PSG6Q00889 435 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 RFLNBQ8N5W9 214 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 CCL4L1Q8NHW4 92 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 PERPQ96FX8 193 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 OR2J1Q9GZK6 312 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 BRWD3Q6RI45 1802 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 OOEPA6NGQ2 149 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 TMEM250H0YL14 139 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 C1QCP02747 245 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 RPS4XP62701 263 aaKnown RBP7.8□□□□□ -1.16
VCL-206ENST00000623461 ELSPBP1Q96BH3 223 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
VCL-206ENST00000623461 C5orf66Q9H5L9 145 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 CASP8AP2Q9UKL3 1982 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 NPIPB7O75200 414 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 CD160O95971 181 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 TEPPQ6URK8 271 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 NIT1Q86X76 327 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 GNB4Q9HAV0 340 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 NDUFB4O95168 129 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 ZNF774Q6NX45 483 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 MRGPRFQ96AM1 343 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 FGF16O43320 207 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 ZNF32P17041 273 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 BTCP35070 178 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 C1QL3Q5VWW1 255 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 DOLPP1Q86YN1 238 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 C1QL4Q86Z23 238 aa7.8□□□□□ -1.16
VCL-206ENST00000623461 H0Y8X5 98 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 H3BMH7 237 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 ORM1P02763 201 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 CBLN3Q6UW01 205 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 HPRT1P00492 218 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 G6PCP35575 357 aa7.79□□□□□ -1.16
VCL-206ENST00000623461 ZP4Q12836 540 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms