RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 DUSP21Q9H596 190 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 PEX16Q9Y5Y5 336 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 MCRIP1C9JLW8 97 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
DDB2-216ENST00000622878 CRTAPO75718 401 aaPredicted RBP12.7□□□□□ -0.38
DDB2-216ENST00000622878 VHLP40337 213 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 GABPB1Q06547 395 aaPredicted RBP12.7□□□□□ -0.38
DDB2-216ENST00000622878 GPR50Q13585 617 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 EBI3Q14213 229 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 Q3ZCU0 254 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 SYT6Q5T7P8 510 aaPredicted RBP12.7□□□□□ -0.38
DDB2-216ENST00000622878 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 TMED9Q9BVK6 235 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 SCN3BQ9NY72 215 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 GHRLQ9UBU3 117 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
DDB2-216ENST00000622878 H0YHG0 523 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 HSD17B6O14756 317 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 CA11O75493 328 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
DDB2-216ENST00000622878 FUT3P21217 361 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 MYF6P23409 242 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 CENPVQ7Z7K6 275 aaPredicted RBP12.69□□□□□ -0.38
DDB2-216ENST00000622878 C5orf56Q8N8D9 126 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 OR4F17Q8NGA8 305 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 OR4F4Q96R69 305 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 ANKRD60Q9BZ19 345 aa12.69□□□□□ -0.38
DDB2-216ENST00000622878 MBNL3Q9NUK0 354 aaKnown RBP12.69□□□□□ -0.38
DDB2-216ENST00000622878 IGHV3-43A0A0B4J1X8 118 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 IGHV1-3A0A0C4DH29 117 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 CCRL2O00421 344 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 SLC31A2O15432 143 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 FGF16O43320 207 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 IGKV1D-33P01593 117 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 IGKV1-33P01594 117 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
DDB2-216ENST00000622878 UCHL1P09936 223 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 UBBP0CG47 229 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 IGHV3-43DP0DP04 118 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 ZNF134P52741 427 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 MED22Q15528 200 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 SLC25A48Q6ZT89 311 aaKnown RBP12.68□□□□□ -0.38
DDB2-216ENST00000622878 Q8N6K4 173 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
DDB2-216ENST00000622878 PDCD6O75340 191 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 HBZP02008 142 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 VSIG8P0DPA2 414 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 TMEM11P17152 192 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 SRMP19623 302 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 REG1BP48304 166 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 ZNF137PP52743 207 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 QRFPP83859 136 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 TPBGQ13641 420 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 TMEM30BQ3MIR4 351 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 C6orf183Q5T699 404 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 TMEM91Q6ZNR0 172 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 IZUMO1Q8IYV9 350 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 OR1L1Q8NH94 360 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 MRPL30Q8TCC3 161 aaKnown RBP12.67□□□□□ -0.38
DDB2-216ENST00000622878 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
DDB2-216ENST00000622878 CST11Q9H112 138 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
DDB2-216ENST00000622878 UBE2QL1A1L167 161 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 SLC22A1O15245 554 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 SPINT2O43291 252 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 CRHBPP24387 322 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 CHATP28329 748 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 RPS27AP62979 156 aaKnown RBP12.66□□□□□ -0.38
DDB2-216ENST00000622878 UNC119Q13432 240 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 HES1Q14469 280 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 HNF4GQ14541 408 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
DDB2-216ENST00000622878 LIPKQ5VXJ0 399 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 GLT8D1Q68CQ7 371 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 OR10K2Q6IF99 312 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 C5orf24Q7Z6I8 188 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 ZNF554Q86TJ5 538 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
DDB2-216ENST00000622878 GFI1Q99684 422 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 TAF9BQ9HBM6 251 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 RAB9BQ9NP90 201 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 ISYNA1Q9NPH2 558 aa12.66□□□□□ -0.38
DDB2-216ENST00000622878 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
DDB2-216ENST00000622878 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms