RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GPR137Q96N19 417 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 TMEM231Q9H6L2 316 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 FOXD3Q9UJU5 478 aaPredicted RBP7.98□□□□□ -1.13
GGA3-223ENST00000621870 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ARFGEF3Q5TH69 2177 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 C9orf170A2RU37 121 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 C19orf67A6NJJ6 358 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ZNF727A8MUV8 499 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ZNF708P17019 499 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ORM2P19652 201 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 GLRXP35754 106 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 IRF3Q14653 427 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ZNF787Q6DD87 383 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 OR5C1Q8NGR4 320 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 SCARB1Q8WTV0 552 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 PGLYRP3Q96LB9 341 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ZDHHC8Q9ULC8 765 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 RGS13O14921 159 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 MT-ND4LP03901 98 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 TAGLN2P37802 199 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 SLC38A11Q08AI6 406 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 LINC01590Q5TEZ4 76 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 LFNGQ8NES3 379 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ZNF596Q8TC21 504 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 RXFP4Q8TDU9 374 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 SNRNP40Q96DI7 357 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 PERPQ96FX8 193 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ABHD14BQ96IU4 210 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ZNF714Q96N38 554 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 RTN4RQ9BZR6 473 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 SAV1Q9H4B6 383 aaPredicted RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 PARD6AQ9NPB6 346 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 PIPOXQ9P0Z9 390 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 OR2W1Q9Y3N9 320 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ANKRD20A5PA0PJZ0 165 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 MBP02144 154 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 NQO2P16083 231 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 VDAC1P21796 283 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ERVFRD-1P60508 538 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 FGF12P61328 243 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 BTN1A1Q13410 526 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 GAMTQ14353 236 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ST3GAL2Q16842 350 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 TEX30Q5JUR7 227 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 CCDC144NLQ6NUI1 221 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 RAB40CQ96S21 281 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 TMEM208Q9BTX3 173 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 TMEM147Q9BVK8 224 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 COL25A1Q9BXS0 654 aaPredicted RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 IGKV1D-43A0A0B4J1Z2 117 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 TMEM229AB2RXF0 380 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 RPL36A-HNRNPH2H7BZ11 118 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 GNG7O60262 68 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 OR2H2O95918 312 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 RCC1P18754 421 aaPredicted RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 RAB4AP20338 218 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 S100A4P26447 101 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 CRYBA2P53672 197 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ERVS71-1P61550 626 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 ZNF658BQ4V348 819 aaPredicted RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 SIGIRRQ6IA17 410 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 DOLPP1Q86YN1 238 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 OR2C3Q8N628 320 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 GP6Q9HCN6 339 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 PCDHGA9Q9Y5G4 932 aaKnown RBP7.97□□□□□ -1.13
GGA3-223ENST00000621870 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
GGA3-223ENST00000621870 IGHV1-69-2A0A0G2JMI3 117 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.13
GGA3-223ENST00000621870 KLF4O43474 513 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.13
GGA3-223ENST00000621870 KLK2P20151 261 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 CD40P25942 277 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 FAM3AP98173 230 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 CLEC12BQ2HXU8 276 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 SMUG1Q53HV7 270 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 H3F3CQ6NXT2 135 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 NEIL1Q96FI4 390 aaPredicted RBP7.96□□□□□ -1.13
GGA3-223ENST00000621870 PATZ1Q9HBE1 687 aaKnown RBP7.96□□□□□ -1.13
GGA3-223ENST00000621870 MALRD1Q5VYJ5 2156 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 RALGAPA2Q2PPJ7 1873 aa7.96□□□□□ -1.13
GGA3-223ENST00000621870 IGHV3OR16-10A0A075B7F0 116 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 ZNF705FA8MVS1 300 aaPredicted RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 H7BYZ3 331 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 SMPD2O60906 423 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 HBZP02008 142 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 ZNF705DP0CH99 300 aaPredicted RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 ZNF705BP0CI00 300 aaPredicted RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 ZNF260Q3ZCT1 412 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 C11orf87Q6NUJ2 197 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 RPUSD3Q6P087 351 aaKnown RBP7.96□□□□□ -1.14
GGA3-223ENST00000621870 WDYHV1Q96HA8 205 aa7.96□□□□□ -1.14
GGA3-223ENST00000621870 MIXL1Q9H2W2 232 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms