RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NOS1APO75052 506 aaPredicted RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 RPP14O95059 124 aaKnown RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 CFDP00746 253 aaPredicted RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 APOC1P02654 83 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 ALDOBP05062 364 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 PTHLHP12272 177 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 IGLL1P15814 213 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 GLRA1P23415 457 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 MAPK3P27361 379 aaPredicted RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 DCTDP32321 178 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 CAPZA1P52907 286 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 AP2S1P53680 142 aaPredicted RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 ZNF121P58317 390 aaPredicted RBP6.33□□□□□ -1.4
CLK1-215ENST00000621181 AP3S2P59780 193 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 ROM1Q03395 351 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 TEX30Q5JUR7 227 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 TMEM69Q5SWH9 247 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 MKXQ8IYA7 352 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 DNAAF1Q8NEP3 725 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 OR51A4Q8NGJ6 313 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 OR10Z1Q8NGY1 313 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 OTOSQ8NHW6 89 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 C15orf40Q8WUR7 153 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 OR8B4Q96RC9 309 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 OR10A2Q9H208 303 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 ZNF702PQ9H963 129 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 MTFP1Q9UDX5 166 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 MPC1Q9Y5U8 109 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 hCG_1809904A0A1W2PP81 198 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 A0A1W2PPE2 198 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 A0A1W2PPH5 198 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 A0A1W2PR64 198 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 A0A1W2PRV1 198 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 ZNF850A8MQ14 1090 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 SRSF10O75494 262 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 PF4V1P10720 104 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 FAHP16930 419 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 COX7A1P24310 79 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 SOX2P48431 317 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 BLVRAP53004 296 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 RPL31P62899 125 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 PRDX4Q13162 271 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 EIF2B1Q14232 305 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 CNN3Q15417 329 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 ZNF626Q68DY1 528 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 SIGIRRQ6IA17 410 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 FAM220AQ7Z4H9 259 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 LYPD6Q86Y78 171 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 OR2T35Q8NGX2 323 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 PIFOQ8TCI5 191 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 INTS14Q96SY0 518 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 SEC22CQ9BRL7 303 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 RGCCQ9H4X1 137 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 STEAP1Q9UHE8 339 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 IGKV1D-17A0A075B6S4 117 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 K7EIL1 84 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 SSNA1O43805 119 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 RHBDL1O75783 438 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 PF4P02776 101 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 GIPP09681 153 aaPredicted RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 IGFBP3P17936 291 aaPredicted RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 CXCL2P19875 107 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 ANXA7P20073 488 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 RAB13P51153 203 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 GPM6AP51674 278 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 CD69Q07108 199 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 RIPPLY1Q0D2K3 151 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 EXOSC2Q13868 293 aaKnown RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 FAM76BQ5HYJ3 339 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 Q8N2B8 174 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 OR6N2Q8NGY6 317 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 GPR148Q8TDV2 347 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 OR5P3Q8WZ94 311 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 PIGCQ92535 297 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
CLK1-215ENST00000621181 PGAM5Q96HS1 289 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 PRSS22Q9GZN4 317 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 ZNF319Q9P2F9 582 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 LAMP5Q9UJQ1 280 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 TCF19Q9Y242 345 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 TMEM14AQ9Y6G1 99 aa6.32□□□□□ -1.4
CLK1-215ENST00000621181 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 SLC17A2O00624 439 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 LDLRAD4O15165 306 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 PSG2P11465 335 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 ACKR3P25106 362 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 ERVFRD-1P60508 538 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 RAP2BP61225 183 aa6.31□□□□□ -1.4
CLK1-215ENST00000621181 TOR2AQ5JU69 321 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms