RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TIMD4Q96H15 378 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 OR8B2Q96RD0 313 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 S1PR2O95136 353 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 TMEM207Q6UWW9 146 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 OR2V1Q8NHB1 315 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 MC5RP33032 325 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 OR3A4PP47883 348 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 C19orf54Q5BKX5 351 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 Q8WTZ3 238 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 GRAMD2BQ96HH9 432 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 PGPEP1Q9NXJ5 209 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 FXYD1O00168 92 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 TMEM25Q86YD3 366 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 OXGR1Q96P68 337 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 C12orf49Q9H741 205 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 OR2K2Q8NGT1 345 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 HMGCLL1Q8TB92 370 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 MICBQ29980 383 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 ST8SIA1Q92185 356 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 C19orf53Q9UNZ5 99 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-208ENST00000618395 HEPACAM2A8MVW5 462 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 POC1AQ8NBT0 407 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 TCFL5Q9UL49 500 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 SIGLEC1Q9BZZ2 1709 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 GPR183P32249 361 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 MAS1LP35410 378 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 GAGE13Q4V321 117 aa13.28□□□□□ -0.28
COL5A1-208ENST00000618395 CCL5P13501 91 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 OR51B2Q9Y5P1 312 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 TIMP1P01033 207 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 RND1Q92730 232 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.28
COL5A1-208ENST00000618395 ZFP64Q9NPA5 681 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 ANK1P16157 1881 aa13.27□□□□□ -0.28
COL5A1-208ENST00000618395 SNRPCP09234 159 aaKnown RBP13.27□□□□□ -0.29
COL5A1-208ENST00000618395 PPP1CAP62136 330 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 CCL14Q16627 93 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 BCORP1Q8N888 145 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 ORAOV1Q8WV07 137 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 PRR13Q9NZ81 148 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-208ENST00000618395 A0A1W2PP11 408 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 LINC00470Q9BZP3 86 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM160Q9NX00 188 aa13.27□□□□□ -0.29
COL5A1-208ENST00000618395 CARHSP1Q9Y2V2 147 aaKnown RBP13.27□□□□□ -0.29
COL5A1-208ENST00000618395 PDCD6O75340 191 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 C1SP09871 688 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 FGF14Q92915 247 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SLC26A1Q9H2B4 701 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 A8MXK9 166 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SLC36A1Q7Z2H8 476 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM208Q9BTX3 173 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 WDR54Q9H977 334 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 VSIG4Q9Y279 399 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SEC11AP67812 179 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 A0A1W2PR80 420 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 PPP1R17O96001 155 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 ISXQ2M1V0 245 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 MOB3BQ86TA1 216 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 CADM4Q8NFZ8 388 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 NEU1Q99519 415 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SIRT5Q9NXA8 310 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 IGHV3-9P01782 118 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 ZNF740Q8NDX6 193 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-208ENST00000618395 PGPEP1LA6NFU8 196 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 SNAI1O95863 264 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-208ENST00000618395 TM4SF1P30408 202 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 RHBDD1Q8TEB9 315 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 GMLQ99445 158 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 ARFGEF1Q9Y6D6 1849 aa13.26□□□□□ -0.29
COL5A1-208ENST00000618395 GNG3P63215 75 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 CD300LDQ6UXZ3 194 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 MRC1P22897 1456 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 AGERQ15109 404 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 FAM219AQ8IW50 185 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 ARFGEF3Q5TH69 2177 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 H3BNC9 293 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 TUBD1Q9UJT1 453 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 CD22P20273 847 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 ZNF562Q6V9R5 426 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 A6NNC1 897 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 B3GALT4O96024 378 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 HIKESHIQ53FT3 197 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 ABCA4P78363 2273 aa13.25□□□□□ -0.29
COL5A1-208ENST00000618395 A0A087WWC5 75 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
COL5A1-208ENST00000618395 CBLN1P23435 193 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms