RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 SPAG4Q9NPE6 437 aa4.85□□□□□ -1.63
SCAMP1-206ENST00000618166 RAP2CQ9Y3L5 183 aa4.85□□□□□ -1.63
SCAMP1-206ENST00000618166 IGHV3-43A0A0B4J1X8 118 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 EVPLLA8MZ36 301 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 NPIPB11E5RHQ5 1161 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 PPP5D1E7EU14 171 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 HSPB6O14558 160 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 NDUFA3O95167 84 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 SCTP09683 121 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 H2BFMP0C1H6 154 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 IGHV3-43DP0DP04 118 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 CLUP10909 449 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 PRKACAP17612 351 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 CD40LGP29965 261 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 GNG11P61952 73 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 SCN1BQ07699 218 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 RIPPLY1Q0D2K3 151 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 TMEM267Q0VDI3 215 aaPredicted RBP4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 ZNF146Q15072 292 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 KRTAP5-11Q6L8G4 156 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 KCTD20Q7Z5Y7 419 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 COMMD2Q86X83 199 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 RNF113BQ8IZP6 322 aaKnown RBP4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 OR2C3Q8N628 320 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 DNAAF1Q8NEP3 725 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 NPBQ8NG41 125 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 OR13C5Q8NGS8 318 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 ZNRF2Q8NHG8 242 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 KCNG3Q8TAE7 436 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 OR51E1Q8TCB6 317 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 GALNT14Q96FL9 552 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 FNDC11Q9BVV2 318 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 TMEM120AQ9BXJ8 343 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 PTTG2Q9NZH5 202 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 KIF25Q9UIL4 384 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 GSTK1Q9Y2Q3 226 aa4.84□□□□□ -1.63
SCAMP1-206ENST00000618166 MEIKINA0A087WXM9 373 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 TMEM213A2RRL7 107 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 FUOMA2VDF0 154 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 UNC119BA6NIH7 251 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 LOC110117498-PIK3R3F6TDL0 507 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 CA1P00915 261 aaPredicted RBP4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 APOC1P02654 83 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 BTF3P20290 206 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 OMPP47874 163 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 OR3A3P47888 321 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 RPS27AP62979 156 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 TMEM42Q69YG0 159 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 DLEU7Q6UYE1 221 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 FUNDC1Q8IVP5 155 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 FAM58AQ8N1B3 248 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 UXS1Q8NBZ7 420 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 FANK1Q8TC84 345 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 SNAPC3Q92966 411 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 CNN2Q99439 309 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 TEAD3Q99594 435 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 IFT27Q9BW83 186 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 LINC00574Q9H8X3 128 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 EXOSC4Q9NPD3 245 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 GPR84Q9NQS5 396 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 BAG5Q9UL15 447 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 RNF150Q9ULK6 438 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 CORO2BQ9UQ03 480 aa4.83□□□□□ -1.64
SCAMP1-206ENST00000618166 SLC33A1O00400 549 aaPredicted RBP4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 ARPC3O15145 178 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 SLC1A6P48664 564 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 GZMMP51124 257 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 ZNF134P52741 427 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 CDC42P60953 191 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 TMEM187Q14656 261 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 MED22Q15528 200 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 TEX30Q5JUR7 227 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 CLVS2Q5SYC1 327 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 LCN1P1Q5VSP4 162 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 ASCL4Q6XD76 172 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 SLC25A48Q6ZT89 311 aaKnown RBP4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 LINC00311Q8N616 119 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 OR6N2Q8NGY6 317 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 GRPEL2Q8TAA5 225 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 TPD52L3Q96J77 140 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 OR52B2Q96RD2 323 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 MRPL20Q9BYC9 149 aaKnown RBP4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 OR52D1Q9H346 318 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 RNF167Q9H6Y7 350 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 DCAF13Q9NV06 445 aaKnown RBP4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 DMRT1Q9Y5R6 373 aa4.82□□□□□ -1.64
SCAMP1-206ENST00000618166 TRBV2A0A0J9YWF9 115 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 SH2D1BO14796 132 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 OR2C1O95371 312 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 CA2P00918 260 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 IGLV3-1P01715 115 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 CSN2P05814 226 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 ZNF44P15621 663 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 FMO3P31513 532 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 ATP1B3P54709 279 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 PLGLAQ15195 96 aa4.81□□□□□ -1.64
SCAMP1-206ENST00000618166 SPIN3Q5JUX0 258 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms