RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IRF2P14316 349 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 FGF7P21781 194 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 MPZP25189 248 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 GNB2P62879 340 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 PAX2Q02962 417 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.09□□□□□ -1.27
GPC6-202ENST00000617456 PDZK1IP1Q13113 114 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 HLXQ14774 488 aaPredicted RBP7.09□□□□□ -1.27
GPC6-202ENST00000617456 OPCMLQ14982 345 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 RAB11BQ15907 218 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 TAF9Q16594 264 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 FBLN7Q53RD9 439 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 RUSC1-AS1Q66K80 236 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 OR2T2Q6IF00 324 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 LHFPL2Q6ZUX7 228 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 OR2C3Q8N628 320 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 OR13C8Q8NGS7 320 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 OR11L1Q8NGX0 322 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 THAP6Q8TBB0 222 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 SPSB1Q96BD6 273 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 ZNF799Q96GE5 643 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 RCC1LQ96I51 464 aaKnown RBP7.09□□□□□ -1.27
GPC6-202ENST00000617456 C4orf36Q96KX1 117 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 NMNAT2Q9BZQ4 307 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 MRPL22Q9NWU5 206 aaKnown RBP7.09□□□□□ -1.27
GPC6-202ENST00000617456 GNG8Q9UK08 70 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 RNF114Q9Y508 228 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 V9GYS6 101 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 TANC2Q9HCD6 1990 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 IGHV3-64DA0A0J9YX35 117 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 KIR2DS1A0A191URI9 304 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 hCG_1809904A0A1W2PP81 198 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 A0A1W2PPE2 198 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 A0A1W2PQL4 384 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 A0A1W2PR64 198 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 TCRBV5S2A0A599 114 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 DISC1C4P0D8 188 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 F5H5K5 113 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 LGALS8O00214 317 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 MLNRO43193 412 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 XRCC2O43543 280 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 GASTP01350 101 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 HLA-DQA2P01906 255 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 PRB2P02812 416 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 LCATP04180 440 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 RAP2AP10114 183 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 TBPP20226 339 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 FASP25445 335 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 GRK5P34947 590 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 MAP2K3P46734 347 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 FGF12P61328 243 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 NCS1P62166 190 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 GRB2P62993 217 aaKnown RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 SURF2Q15527 256 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 MEP1BQ16820 701 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 GPR157Q5UAW9 335 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 OR2T5Q6IEZ7 315 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 TRAT1Q6PIZ9 186 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 Q6YL49 198 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 FAM220AQ7Z4H9 259 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 LINC01551Q86U37 167 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 UBAC2Q8NBM4 344 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 SDR9C7Q8NEX9 313 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 PROKR2Q8NFJ6 384 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 OR11H4Q8NGC9 324 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 OR2G2Q8NGZ5 317 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 OR2T29Q8NH02 315 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 OR8U1Q8NH10 309 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 RNASEH2CQ8TDP1 164 aaKnown RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 SPRYD4Q8WW59 207 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 RAB40AQ8WXH6 277 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 NEIL1Q96FI4 390 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 URM1Q9BTM9 101 aaKnown RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 PRRG3Q9BZD7 231 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 ACTR3CQ9C0K3 210 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 C11orf54Q9H0W9 315 aaPredicted RBP7.08□□□□□ -1.28
GPC6-202ENST00000617456 MMP28Q9H239 520 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 AUNIPQ9H7T9 357 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 REEP1Q9H902 201 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 ABCB9Q9NP78 766 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 CMC2Q9NRP2 79 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 ZNF391Q9UJN7 358 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 POMT1Q9Y6A1 747 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 V9GYH0 126 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 NOTCH3Q9UM47 2321 aa7.08□□□□□ -1.28
GPC6-202ENST00000617456 DOCK11Q5JSL3 2073 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.07□□□□□ -1.28
GPC6-202ENST00000617456 A0A1W2PQ09 198 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 CD300LBA8K4G0 201 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 ZNF878C9JN71 531 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 DVL1O14640 695 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 PLA2G10O15496 165 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 CSTBP04080 98 aaKnown RBP7.07□□□□□ -1.28
GPC6-202ENST00000617456 ANOS1P23352 680 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 TNFSF8P32971 234 aa7.07□□□□□ -1.28
GPC6-202ENST00000617456 CFHR2P36980 270 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms