RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 AKR1E2Q96JD6 320 aa15.14■□□□□ 0.01
CDX1-202ENST00000616154 DPM3Q9P2X0 92 aa15.14■□□□□ 0.01
CDX1-202ENST00000616154 KBTBD11-OT1A0A1B0GTJ5 212 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 A0A1W2PRX2 142 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 PDCD5O14737 125 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 CDRT1O95170 752 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 MAS1P04201 325 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 CD33P20138 364 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 RAB3BP20337 219 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 BRS3P32247 399 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 RPS19P39019 145 aaKnown RBP15.13■□□□□ 0.01
CDX1-202ENST00000616154 GDNFP39905 211 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 PSMD7P51665 324 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 MPV17LQ2QL34 196 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 PAN3Q58A45 887 aaKnown RBP15.13■□□□□ 0.01
CDX1-202ENST00000616154 PRAMEF5Q5TYX0 476 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 ABHD12Q8N2K0 398 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 OSR2Q8N2R0 312 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 ZNF596Q8TC21 504 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 UQCC2Q9BRT2 126 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 DCSTAMPQ9H295 470 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 ST3GAL6Q9Y274 331 aa15.13■□□□□ 0.01
CDX1-202ENST00000616154 TMEM127O75204 238 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 CLEC2LP0C7M8 214 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 PF4V1P10720 104 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 SERPINB10P48595 397 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 ARHGDIBP52566 201 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 OR10A3P58181 314 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 TCTEX1D4Q5JR98 221 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 BAIAP2L2Q6UXY1 529 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 DYNC2LI1Q8TCX1 351 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 SLC25A46Q96AG3 418 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 MRPS24Q96EL2 167 aaKnown RBP15.12■□□□□ 0.01
CDX1-202ENST00000616154 BARHL1Q9BZE3 327 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 PCDHB16Q9NRJ7 776 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 AK6Q9Y3D8 172 aaKnown RBP15.12■□□□□ 0.01
CDX1-202ENST00000616154 V9GY05 133 aa15.12■□□□□ 0.01
CDX1-202ENST00000616154 NOTOA8MTQ0 251 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 LEUTXA8MZ59 168 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 NPIPB11E5RHQ5 1161 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 OR2F2O95006 317 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 HTR3BO95264 441 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 IGLL1P15814 213 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 CD24P25063 80 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 GPR176Q14439 515 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 GLT8D1Q68CQ7 371 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 CENPVQ7Z7K6 275 aaPredicted RBP15.11■□□□□ 0.01
CDX1-202ENST00000616154 ZNF565Q8N9K5 539 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 OR4D6Q8NGJ1 314 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 OR13A1Q8NGR1 328 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 PLPPR1Q8TBJ4 325 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 CAPSLQ8WWF8 208 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 KIRREL1Q96J84 757 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 SLC25A33Q9BSK2 321 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 ZNF581Q9P0T4 197 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 RCC2Q9P258 522 aaKnown RBP15.11■□□□□ 0.01
CDX1-202ENST00000616154 KIF25Q9UIL4 384 aa15.11■□□□□ 0.01
CDX1-202ENST00000616154 TSSC4Q9Y5U2 329 aaPredicted RBP15.11■□□□□ 0.01
CDX1-202ENST00000616154 TCRBV4S1A1TA0A5B7 111 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 CCDC160A6NGH7 325 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 IFITM5A6NNB3 132 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 AIPO00170 330 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 SLC17A2O00624 439 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 CSTBP04080 98 aaKnown RBP15.1■□□□□ 0.01
CDX1-202ENST00000616154 GTF2F2P13984 249 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 HLA-DRB5Q30154 266 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 CROCCP3Q8IVE0 287 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 SUMF2Q8NBJ7 301 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 OR10A7Q8NGE5 316 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 CREB3L1Q96BA8 519 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 RBM14Q96PK6 669 aaKnown RBP15.1■□□□□ 0.01
CDX1-202ENST00000616154 DPCDQ9BVM2 203 aaPredicted RBP15.1■□□□□ 0.01
CDX1-202ENST00000616154 ZNF286AQ9HBT8 521 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 CALYQ9NYX4 217 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 ING4Q9UNL4 249 aa15.1■□□□□ 0.01
CDX1-202ENST00000616154 MEIKINA0A087WXM9 373 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 LY6LH3BQJ8 138 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 HSPB6O14558 160 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 GEMIN2O14893 280 aaKnown RBP15.09■□□□□ 0.01
CDX1-202ENST00000616154 OR7C1O76099 320 aaPredicted RBP15.09■□□□□ 0.01
CDX1-202ENST00000616154 CEACAM3P40198 252 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 MXD1Q05195 221 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 ABCA11PQ4W5N1 156 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 SFXN4Q6P4A7 337 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 OR4X2Q8NGF9 303 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 OR6M1Q8NGM8 313 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 S100A13Q99584 98 aa15.09■□□□□ 0.01
CDX1-202ENST00000616154 CCDC59Q9P031 241 aaKnown RBP15.09■□□□□ 0.01
CDX1-202ENST00000616154 A0A1W2PP11 408 aa15.08■□□□□ 0
CDX1-202ENST00000616154 FAM172BPA6NC97 362 aa15.08■□□□□ 0
CDX1-202ENST00000616154 OOSP1A8MZH6 123 aa15.08■□□□□ 0
CDX1-202ENST00000616154 MPIG6BO95866 241 aa15.08■□□□□ 0
CDX1-202ENST00000616154 PF4P02776 101 aa15.08■□□□□ 0
CDX1-202ENST00000616154 AMY1AP04745 511 aa15.08■□□□□ 0
CDX1-202ENST00000616154 AMY2AP04746 511 aa15.08■□□□□ 0
CDX1-202ENST00000616154 LPLP06858 475 aa15.08■□□□□ 0
CDX1-202ENST00000616154 SERPINA2P20848 420 aa15.08■□□□□ 0
CDX1-202ENST00000616154 GLP1RP43220 463 aa15.08■□□□□ 0
CDX1-202ENST00000616154 SLC22A6Q4U2R8 563 aa15.08■□□□□ 0
CDX1-202ENST00000616154 TPTE2P1Q5T6R2 138 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms