RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CCR5P51681 352 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 RPEQ96AT9 228 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 TOX2Q96NM4 488 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 A1L4Q6 167 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 BEND2Q8NDZ0 799 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
CHD1-212ENST00000614616 CA3P07451 260 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 GGTLC2Q14390 218 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
CHD1-212ENST00000614616 DYSFO75923 2080 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 LINC00615Q96LM1 132 aaPredicted RBP12.14□□□□□ -0.47
CHD1-212ENST00000614616 DUSP23Q9BVJ7 150 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
CHD1-212ENST00000614616 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 A8MWL6 223 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 FGF17O60258 216 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 ORAOV1Q8WV07 137 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
CHD1-212ENST00000614616 NDUFB4O95168 129 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 DRD1P21728 446 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 OR1F12Q8NHA8 337 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 LSM10Q969L4 123 aaKnown RBP12.13□□□□□ -0.47
CHD1-212ENST00000614616 MED29Q9NX70 200 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 H3BNC9 293 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 K7ESM1 405 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 STARD6P59095 220 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 ISXQ2M1V0 245 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 OTPQ5XKR4 325 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 CDAP32320 146 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 LCN2P80188 198 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 THSD4Q6ZMP0 1018 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 COPS9Q8WXC6 57 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
CHD1-212ENST00000614616 MEGF9Q9H1U4 602 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 SIP14410 1827 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 SOCS1O15524 211 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 CD200R1LQ6Q8B3 271 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 SH3BGRL3Q9H299 93 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 TBL2Q9Y4P3 447 aaKnown RBP12.13□□□□□ -0.47
CHD1-212ENST00000614616 CD74P04233 296 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 TMEM211Q6ICI0 200 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 CNRIP1Q96F85 164 aaPredicted RBP12.13□□□□□ -0.47
CHD1-212ENST00000614616 SLC52A3Q9NQ40 469 aa12.13□□□□□ -0.47
CHD1-212ENST00000614616 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 NDUFS6O75380 124 aaKnown RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 ARF6P62330 175 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 DNAJB12Q9NXW2 375 aaKnown RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 SRIP30626 198 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 METAP1P53582 386 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 SLC35B1P78383 322 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 OR13G1Q8NGZ3 307 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 VENTXO95231 258 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 ACRP10323 421 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TNFRSF4P43489 277 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 OR1D5P58170 312 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TMEM230Q96A57 120 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 GCM2O75603 506 aaPredicted RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 RBKSQ9H477 322 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 GBGT1Q8N5D6 347 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TSPAN32Q96QS1 320 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
CHD1-212ENST00000614616 TRBV5-3A0A0A0MS03 114 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 GRIFINA4D1Z8 144 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 MPDU1O75352 247 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 RRADP55042 308 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 GNG3P63215 75 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 MYBPHQ13203 477 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 SPINK9Q5DT21 86 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 FNDC7Q5VTL7 733 aa12.12□□□□□ -0.47
CHD1-212ENST00000614616 GNG7O60262 68 aa12.11□□□□□ -0.47
CHD1-212ENST00000614616 ID4P47928 161 aa12.11□□□□□ -0.47
CHD1-212ENST00000614616 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD1-212ENST00000614616 RELQ04864 619 aaPredicted RBP12.11□□□□□ -0.47
CHD1-212ENST00000614616 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
CHD1-212ENST00000614616 SUMO3P55854 103 aaPredicted RBP12.11□□□□□ -0.47
CHD1-212ENST00000614616 LINC00596Q86U02 117 aa12.11□□□□□ -0.47
CHD1-212ENST00000614616 APOBEC3DQ96AK3 386 aaPredicted RBP12.11□□□□□ -0.47
CHD1-212ENST00000614616 A0A1B0GX78 115 aa12.11□□□□□ -0.47
CHD1-212ENST00000614616 C1QTNF9BB2RNN3 333 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms