RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 BCL3P20749 454 aa10.18□□□□□ -0.78
CDH5-208ENST00000614547 SPSB1Q96BD6 273 aa10.18□□□□□ -0.78
CDH5-208ENST00000614547 EGLN1Q9GZT9 426 aa10.18□□□□□ -0.78
CDH5-208ENST00000614547 PRDM13Q9H4Q3 707 aa10.18□□□□□ -0.78
CDH5-208ENST00000614547 LRRC3CA6NJW4 275 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 IGHV3-13P01766 116 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 IGHV3-7P01780 117 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 PLA2G5P39877 138 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 OR5I1Q13606 314 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 PLPPR5Q32ZL2 321 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 PHYHD1Q5SRE7 291 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 SLC25A47Q6Q0C1 308 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 ANKRD37Q7Z713 158 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 TMEM222Q9H0R3 208 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
CDH5-208ENST00000614547 MDFIC2A0A1B0GVS7 189 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 PROB1E7EW31 1015 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 CDS2O95674 445 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 EDDM3BP56851 147 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 HIST1H3AP68431 136 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 DPPA3Q6W0C5 159 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 SLC35E3Q7Z769 313 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 CLDND2Q8NHS1 167 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
CDH5-208ENST00000614547 NINJ1Q92982 152 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 EML5Q05BV3 1969 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 IGHV1OR21-1A0A087WYE8 117 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 A0A1B0GUS0 222 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 ZNF17P17021 662 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 MSX1P28360 303 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 SLC38A11Q08AI6 406 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 IGFBP7Q16270 282 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 FFAR4Q5NUL3 377 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 ZNF664Q8N3J9 261 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 SMRP1Q8NCR6 262 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 OR10V1Q8NGI7 309 aa10.17□□□□□ -0.78
CDH5-208ENST00000614547 LYRM2Q9NU23 88 aaPredicted RBP10.17□□□□□ -0.78
CDH5-208ENST00000614547 AMBPP02760 352 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 MDH2P40926 338 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 THBS3P49746 956 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 HTD2P86397 168 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 ZNF90Q03938 601 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 PLP2Q04941 152 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 ZP4Q12836 540 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 IL24Q13007 206 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 TIPARPQ7Z3E1 657 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 SELENOHQ8IZQ5 122 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 IFI44Q8TCB0 444 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 VN1R17PQ8TDU5 208 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 SPACA9Q96E40 222 aaPredicted RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 VAX2Q9UIW0 290 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 LOC102725191A0A1B0GVB3 256 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 SYNGR2O43760 224 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 OR4A8P0C604 315 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 MOB3AQ96BX8 217 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 MSI2Q96DH6 328 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 CDCA3Q99618 268 aaPredicted RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 IGKV1D-13A0A0B4J2D9 117 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 KIR2DS1A0A191URI9 304 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 OR6C6A6NF89 314 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 AQP7O14520 342 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 TCF21O43680 179 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 P04436 131 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 IGKV1-13P0DP09 117 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 LYL1P12980 280 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 PMCHP20382 165 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 KITLGP21583 273 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 KIR2DS4P43632 304 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 FUT6P51993 359 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 SUCLG1P53597 346 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 SLC35B1P78383 322 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 EIF3IQ13347 325 aaKnown RBP10.16□□□□□ -0.78
CDH5-208ENST00000614547 KIR2DS1Q14954 304 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 SPSB3Q6PJ21 355 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 GATAD1Q8WUU5 269 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 MVB12AQ96EY5 273 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 RASL10BQ96S79 203 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 NAT8Q9UHE5 227 aa10.16□□□□□ -0.78
CDH5-208ENST00000614547 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 C9J4A7 227 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 GDF1P27539 372 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 PCP4P48539 62 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 ZNF506Q5JVG8 444 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 TMPRSS7Q7RTY8 843 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 D2HGDHQ8N465 521 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 RCC1LQ96I51 464 aaKnown RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 LOC102723971A0A1B0GUV8 181 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 MRPL33O75394 65 aaKnown RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 GRPP07492 148 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 PNRC1Q12796 327 aaPredicted RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 ENDOGQ14249 297 aaKnown RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 PDLIM3Q53GG5 364 aaPredicted RBP10.15□□□□□ -0.78
CDH5-208ENST00000614547 ETFRF1Q6IPR1 90 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 OR10G4Q8NGN3 311 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 OR10G9Q8NGN4 311 aa10.15□□□□□ -0.78
CDH5-208ENST00000614547 OR10G7Q8NGN6 311 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms