RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 BORCS8Q96FH0 119 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TTTY12Q9BZ98 90 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TPRP12270 2363 aaKnown RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ICE1Q9Y2F5 2266 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TRBV6-6A0A0A6YYG2 114 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IGHV3-64DA0A0J9YX35 117 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 EREGO14944 169 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 B4GALT1P15291 398 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF92Q03936 586 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CST9LP1Q5W188 147 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FAM210BQ96KR6 192 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FER1L6-AS2Q96M78 137 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SIGLEC12Q96PQ1 595 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MSL2Q9HCI7 577 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 KLF13Q9Y2Y9 288 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IGKV1-12A0A0C4DH73 117 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IGKV1D-12P01611 117 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 LCATP04180 440 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PATE4P0C8F1 98 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TMEM268Q5VZI3 342 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CPEB3Q8NE35 698 aaKnown RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 LAMP3Q9UQV4 416 aa9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 UBE2J1Q9Y385 318 aaPredicted RBP9.31□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MASP2O00187 686 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ATP6V0CP27449 155 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SSTP61278 116 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR1C1Q15619 314 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SPINK14Q6IE38 97 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PRR18Q8N4B5 295 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR5C1Q8NGR4 320 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NBEAQ8NFP9 2946 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPQ1 181 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PDCD6O75340 191 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HNF1AP20823 631 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FUT3P21217 361 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DUSP1P28562 367 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IL2RGP31785 369 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 THNSL2Q86YJ6 484 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DMDP11532 3685 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GPR137BO60478 399 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SP1P08047 785 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF154Q13106 437 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SLC22A25Q6T423 547 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ABHD3Q8WU67 409 aa9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 APOBEC3DQ96AK3 386 aaPredicted RBP9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF845Q96IR2 970 aaPredicted RBP9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ALKBH3Q96Q83 286 aaPredicted RBP9.3□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 A0A1B0GUS0 222 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DEDDO75618 318 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TRAPPC6AO75865 159 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SYNGR4O95473 234 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CD55P08174 381 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FOLR2P14207 255 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HIST1H1BP16401 226 aaKnown RBP9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NCR3LG1Q68D85 454 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IGF2-ASQ6U949 168 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR14J1Q9UGF5 321 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 KLRC4-KLRK1H3BQV0 150 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CCNOP22674 350 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RTP5Q14D33 572 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ELOBQ15370 118 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TCEAL6Q6IPX3 200 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 REC114Q7Z4M0 266 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MOB3AQ96BX8 217 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 CALHM2Q9HA72 323 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SLC7A10Q9NS82 523 aa9.29□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NKX2-6A6NCS4 301 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TECTAO75443 2155 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PRSS8Q16651 343 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TMEM251Q8N6I4 163 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ABHD5Q8WTS1 349 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 C18orf12Q96KH6 178 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 POM121L2Q96KW2 1035 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PLK3Q9H4B4 646 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF442Q9H7R0 627 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 R4GN57 208 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 SEC14L6B5MCN3 397 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FAM157AC9JC47 383 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MBP02144 154 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DANCRP0C864 163 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NUBP1P53384 320 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms