RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LILRB2Q8N423 598 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 ZNF808Q8N4W9 903 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-207ENST00000612273 COMMD1Q8N668 190 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 TOLLIPQ9H0E2 274 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 CEBPZOSA8MTT3 80 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 PITX3O75364 302 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 ASCL4Q6XD76 172 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 SSX3Q99909 188 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 GGACTQ9BVM4 153 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
COL6A1-207ENST00000612273 F2RP25116 425 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 S100A2P29034 98 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 LINC00205P59089 165 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 ARL16Q0P5N6 197 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 CT55Q8WUE5 264 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 SH2D2AQ9NP31 389 aa11.99□□□□□ -0.49
COL6A1-207ENST00000612273 CHD3Q12873 2000 aaKnown RBP11.99□□□□□ -0.49
COL6A1-207ENST00000612273 IGHV2-5P01817 119 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 PAX9P55771 341 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 UCP3P55916 312 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 FGF12P61328 243 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 COL19A1Q14993 1142 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-207ENST00000612273 MCEMP1Q8IX19 187 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 CLDN23Q96B33 292 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 PFDN5Q99471 154 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 TRAPPC2LQ9UL33 140 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 GRPP07492 148 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 S100PP25815 95 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 LTC4SQ16873 150 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 NMSQ5H8A3 153 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 KCNE4Q8WWG9 221 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 RBMXL1Q96E39 390 aaKnown RBP11.98□□□□□ -0.49
COL6A1-207ENST00000612273 RHOVQ96L33 236 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 TAAR9Q96RI9 348 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
COL6A1-207ENST00000612273 PRSS50Q9UI38 385 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
COL6A1-207ENST00000612273 KRASP01116 189 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 ERVS71-1P61550 626 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 ELOBQ15370 118 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 SSX7Q7RTT5 188 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 NUFIP2Q7Z417 695 aaKnown RBP11.98□□□□□ -0.49
COL6A1-207ENST00000612273 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 C1QTNF5Q9BXJ0 243 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 DEFB127Q9H1M4 99 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 KIAA1456Q9P272 454 aa11.98□□□□□ -0.49
COL6A1-207ENST00000612273 ADAMTS20P59510 1910 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 CACNA1HO95180 2353 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 CD200P41217 278 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 SRPXP78539 464 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 PLP2Q04941 152 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 DCAF12Q5T6F0 453 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TPRX1Q8N7U7 411 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 PLPPR1Q8TBJ4 325 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 PRO1933Q9H354 126 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
COL6A1-207ENST00000612273 ATP23Q9Y6H3 246 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TRAV24A0A0B4J272 114 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 UBE2L5PA0A1B0GUS4 154 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
COL6A1-207ENST00000612273 DEGS1O15121 323 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 SOX15O60248 233 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 NAPSAO96009 420 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 IGHV3-13P01766 116 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 IGHV3-7P01780 117 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 CD55P08174 381 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 FABP4P15090 132 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 ID3Q02535 119 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TLE4Q04727 773 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 Q6ZSR3 168 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 S100PBPQ96BU1 408 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 TVP23CQ96ET8 276 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 PSENENQ9NZ42 101 aa11.97□□□□□ -0.49
COL6A1-207ENST00000612273 IFITM10A6NMD0 228 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ANKRD30BLA7E2S9 258 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.49
COL6A1-207ENST00000612273 CEACAM21Q3KPI0 293 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ABHD17BQ5VST6 288 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 PCSK4Q6UW60 755 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 APH1AQ96BI3 265 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 ATP5SQ99766 215 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 LOXL2Q9Y4K0 774 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 CYTIPO60759 359 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 SYNGR4O95473 234 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 CLDN1O95832 211 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 UCP1P25874 307 aa11.96□□□□□ -0.49
COL6A1-207ENST00000612273 PMP22Q01453 160 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms