RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	SRXN1	Q9BYN0	137 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	IGKV1-6	A0A0C4DH72	117 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	XKRY2	A2RUG3	117 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	LRP5L	A4QPB2	252 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	PPP5D1	E7EU14	171 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	TNFSF11	O14788	317 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	SERPINE2	P07093	398 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	MYF5	P13349	255 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	FGF8	P55075	233 aa	Predicted RBP	11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	TMEM241	Q24JQ0	296 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	BEND4	Q6ZU67	534 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	OR51G1	Q8NGK1	321 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	LSM10	Q969L4	123 aa	Known RBP	11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	HIST1H2AA	Q96QV6	131 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	DDA1	Q9BW61	102 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	RIMS4	Q9H426	269 aa	Predicted RBP	11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	RBKS	Q9H477	322 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	PRSS50	Q9UI38	385 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	RARRES3	Q9UL19	164 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	LAMP3	Q9UQV4	416 aa		11.75	□□□□□ -0.53
UBE2F-223	ENST00000612130	TMEM250	H0YL14	139 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130		H7BYZ3	331 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	SYNGR2	O43760	224 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	EDN3	P14138	238 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	BCL3	P20749	454 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	MDK	P21741	143 aa	Predicted RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	MEF2B	Q02080	365 aa	Predicted RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	SLC10A1	Q14973	349 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	USF2	Q15853	346 aa	Predicted RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	BSX	Q3C1V8	233 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	FOXB1	Q99853	325 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	TCAP	O15273	167 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	TNFSF12	O43508	249 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	ZNF737	O75373	536 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	HRAS	P01112	189 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	METTL15P1	P0C7V9	234 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	GALR1	P47211	349 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	RAC3	P60763	192 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	NUTF2	P61970	127 aa	Known RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	SHH	Q15465	462 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	C5orf24	Q7Z6I8	188 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	TGIF2LX	Q8IUE1	241 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	SLC25A45	Q8N413	288 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	C17orf78	Q8N4C9	275 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	C1QTNF5	Q9BXJ0	243 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	WDR61	Q9GZS3	305 aa	Known RBP	11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	PRDM14	Q9GZV8	571 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	PSENEN	Q9NZ42	101 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	TIMM9	Q9Y5J7	89 aa		11.74	□□□□□ -0.53
UBE2F-223	ENST00000612130	TRBV6-6	A0A0A6YYG2	114 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	C2CD4D	B7Z1M9	353 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	CD55	P08174	381 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	JMJD7	P0C870	316 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	CCL3	P10147	92 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	CCKAR	P32238	428 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	PCOLCE	Q15113	449 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	RIPPLY2	Q5TAB7	128 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	FIP1L1	Q6UN15	594 aa	Known RBP	11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	PCSK4	Q6UW60	755 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	TMEM18	Q96B42	140 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	MRPL37	Q9BZE1	423 aa	Known RBP	11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	PLK3	Q9H4B4	646 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	OR2W1	Q9Y3N9	320 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	KIAA1549	Q9HCM3	1950 aa		11.73	□□□□□ -0.53
UBE2F-223	ENST00000612130	IL18BP	O95998	194 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	SNRPC	P09234	159 aa	Known RBP	11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	PATE4	P0C8F1	98 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	PSG2	P11465	335 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	RPL23	P62829	140 aa	Known RBP	11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ARL16	Q0P5N6	197 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	P2RY6	Q15077	328 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ACTL10	Q5JWF8	245 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ZNF66	Q6ZN08	573 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	LINC00596	Q86U02	117 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	HAPLN4	Q86UW8	402 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	BATF2	Q8N1L9	274 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	NEK7	Q8TDX7	302 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	PROK2	Q9HC23	129 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	CACNG5	Q9UF02	275 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ZNF716	A6NP11	495 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	CD300LB	A8K4G0	201 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	TYMS	P04818	313 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	HNF4G	Q14541	408 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	AAED1	Q7RTV5	226 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	SMRP1	Q8NCR6	262 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	LHX4	Q969G2	390 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ANAPC16	Q96DE5	110 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ADGRG7	Q96K78	797 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	GON4L	Q3T8J9	2241 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	ASXL3	Q9C0F0	2248 aa		11.72	□□□□□ -0.53
UBE2F-223	ENST00000612130	UNC13C	Q8NB66	2214 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	LOC102723996	A0A087X1L8	192 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	GGCT	O75223	188 aa	Known RBP	11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	IAPP	P10997	89 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	GZMH	P20718	246 aa		11.71	□□□□□ -0.53
UBE2F-223	ENST00000612130	TUBG1	P23258	451 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms