RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PKIAP61925 76 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 PNRC1Q12796 327 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 HAPLN4Q86UW8 402 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 MYPOPQ86VE0 399 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 C1QTNF5Q9BXJ0 243 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 RFPL3SP0C7P2 107 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 CLDN15P56746 228 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 HNF4GQ14541 408 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 C9orf135Q5VTT2 229 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 BEND4Q6ZU67 534 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 REC114Q7Z4M0 266 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 FRYQ5TBA9 3013 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 TRBV24-1A0A075B6N3 115 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 RNPS1Q15287 305 aaKnown RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 NECAP1Q8NC96 275 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR10D3Q8NH80 312 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 SCGB1C1Q8TD33 95 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 TECTBQ96PL2 329 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 RBKSQ9H477 322 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 CACNG5Q9UF02 275 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FREM1Q5H8C1 2179 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A8PA6NJQ4 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 GJE1A6NN92 205 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A22PA8MWA6 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 SYNGR1O43759 233 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 SERPINE2P07093 398 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 KIR2DS4P43632 304 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 ELLP55199 621 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 CLN3Q13286 438 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 KIR2DS1Q14954 304 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR1K1Q8NGR3 316 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 MRPL30Q8TCC3 161 aaKnown RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 CDH20Q9HBT6 801 aa12.89□□□□□ -0.35
PCDHGB1-202ENST00000611598 TSTD3H0UI37 97 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 HS3ST1O14792 307 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 PCBD1P61457 104 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 SRSF7Q16629 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 RDH5Q92781 318 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 RAB40CQ96S21 281 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 TRAV39A0A0B4J263 110 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 C9J4A7 227 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 NDUFB7P17568 137 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 PITPNC1Q9UKF7 332 aa12.88□□□□□ -0.35
PCDHGB1-202ENST00000611598 A0A096LPE4 126 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OPN1MWP04001 364 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OPN1MW2P0DN77 364 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OPN1MW3P0DN78 364 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 MDH2P40926 338 aaKnown RBP12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 ADIRFQ15847 76 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 DNLZQ5SXM8 178 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 ABLIM2Q6H8Q1 611 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 IL1F10Q8WWZ1 152 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 PSENENQ9NZ42 101 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 ARGFXA6NJG6 315 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 DNPH1O43598 174 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 SYNGR2O43760 224 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 AMBPP02760 352 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 SELLP14151 372 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 SSTP61278 116 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 COL10A1Q03692 680 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 CLEC12BQ2HXU8 276 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
PCDHGB1-202ENST00000611598 OR10A7Q8NGE5 316 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms