RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 AKR1C2P52895 323 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 POLR2GP62487 172 aaKnown RBP eCLIP10.08□□□□□ -0.8
SRRT-213ENST00000611405 VAMP2P63027 116 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 ID3Q02535 119 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 NHLH2Q02577 135 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 HMGN3Q15651 99 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 ZNF718Q3SXZ3 478 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 BHLHA15Q7RTS1 189 aaPredicted RBP10.08□□□□□ -0.8
SRRT-213ENST00000611405 SVBPQ8N300 66 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 NKX6-2Q9C056 277 aaPredicted RBP10.08□□□□□ -0.8
SRRT-213ENST00000611405 PLEKHF2Q9H8W4 249 aa10.08□□□□□ -0.8
SRRT-213ENST00000611405 MBD3L4A6NDZ8 208 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 MBD3L3A6NE82 208 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 MBD3L5A6NJ08 208 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 TIMM8AO60220 97 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 SPP1P10451 314 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 SLC25A6P12236 298 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 TESK1Q15569 626 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 Q6ZRG5 221 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 MBD3L2Q8NHZ7 208 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 TLNRD1Q9H1K6 362 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 TMEM30CPA0ZSE6 113 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 F8W036 122 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 SERPINE2P07093 398 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 LMO1P25800 156 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 GCH1P30793 250 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 RAB5CP51148 216 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 CXorf66Q5JRM2 361 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 C11orf53Q8IXP5 236 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 LYPD6BQ8NI32 183 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
SRRT-213ENST00000611405 UQCC1Q9NVA1 299 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 PTPRBP23467 1997 aa10.07□□□□□ -0.8
SRRT-213ENST00000611405 TRAV39A0A0B4J263 110 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 HSPA12AO43301 675 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 SSSCA1O60232 199 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 DANCRP0C864 163 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 ARHGDIBP52566 201 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 MBNL2Q5VZF2 373 aaKnown RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 KCNIP1Q9NZI2 227 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 ARID1AO14497 2285 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 ESPL1Q14674 2120 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 IGHV1-18A0A0C4DH31 117 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 IGHV3-64DA0A0J9YX35 117 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 A0A1B0GU03 582 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 OR5H1A6NKK0 313 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 C1QTNF9BB2RNN3 333 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 PITX3O75364 302 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 HEXAP06865 529 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 MZT1Q08AG7 82 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 OR14J1Q9UGF5 321 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 RNASEK-C17orf49H0YIS7 233 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 MUC1P15941 1255 aaPredicted RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 ZNF266Q14584 549 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 SLC35E4Q6ICL7 350 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 PRSS33Q8NF86 280 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 OR51H1Q8NH63 302 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 MAGT1Q9H0U3 335 aa10.06□□□□□ -0.8
SRRT-213ENST00000611405 RBM7Q9Y580 266 aaKnown RBP10.06□□□□□ -0.8
SRRT-213ENST00000611405 WRBO00258 174 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 IGLV2-14P01704 120 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 PSG2P11465 335 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 FABP6P51161 128 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 BAXQ07812 192 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 EIF2S3LQ2VIR3 472 aaKnown RBP10.05□□□□□ -0.8
SRRT-213ENST00000611405 ACP7Q6ZNF0 438 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 Q6ZS92 163 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 LSM10Q969L4 123 aaKnown RBP10.05□□□□□ -0.8
SRRT-213ENST00000611405 GPR146Q96CH1 333 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 TMEM231Q9H6L2 316 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 URB1O60287 2271 aaKnown RBP10.05□□□□□ -0.8
SRRT-213ENST00000611405 A0A1B0GWJ7 208 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 A6NLC8 198 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 CD5P06127 495 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 CEACAM6P40199 344 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 CD200P41217 278 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 Q6ZR03 302 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 ZNF826PQ6ZT77 177 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 LIN7CQ9NUP9 197 aaKnown RBP10.05□□□□□ -0.8
SRRT-213ENST00000611405 CACFD1Q9UGQ2 172 aa10.05□□□□□ -0.8
SRRT-213ENST00000611405 PPP1R3CQ9UQK1 317 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms