RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ATP6V0E1O15342 81 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 SLC16A6O15403 523 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ORC5O43913 435 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ZNF19P17023 458 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 NANOS3P60323 173 aaKnown RBP13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ATAD3CQ5T2N8 411 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ACSM6Q6P461 480 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 LYPD6Q86Y78 171 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 STX19Q8N4C7 294 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 OR10K1Q8NGX5 313 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ZNF251Q9BRH9 671 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 RSRP1Q9BUV0 290 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 DHDHQ9UQ10 334 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
CHMP4A-211ENST00000609024 SPINT2O43291 252 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 RAB3AP20336 220 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 ALKBH1Q13686 389 aaKnown RBP13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 Q3ZCU0 254 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 ANKRD13BQ86YJ7 626 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 ZDHHC13Q8IUH4 622 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 RNF166Q96A37 237 aaPredicted RBP13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 FLYWCH2Q96CP2 140 aaKnown RBP13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 KIAA1456Q9P272 454 aa13.42□□□□□ -0.26
CHMP4A-211ENST00000609024 AIPO00170 330 aa13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 ARSBP15848 533 aa13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 KIAA0141Q14154 515 aaPredicted RBP13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 ECSCRQ19T08 205 aa13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 CST11Q9H112 138 aa13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 ING4Q9UNL4 249 aa13.41□□□□□ -0.26
CHMP4A-211ENST00000609024 CSMD3Q7Z407 3707 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 A0A1W2PN81 502 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 TCRBV3S1A0A5B6 114 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 OR4C45A6NMZ5 311 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 C15orf65H3BRN8 121 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 GABRPO00591 440 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 LGALS1P09382 135 aaKnown RBP13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 CD40LGP29965 261 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 CHRNA7P36544 502 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 ACTBP60709 375 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 KDM4DQ6B0I6 523 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 LIN54Q6MZP7 749 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 PRR18Q8N4B5 295 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 ABHD5Q8WTS1 349 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 C4orf36Q96KX1 117 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 TOLLIPQ9H0E2 274 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 METTL9Q9H1A3 318 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 RIBC2Q9H4K1 309 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 IMPAD1Q9NX62 359 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 TRAPPC2LQ9UL33 140 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 STUB1Q9UNE7 303 aa13.4□□□□□ -0.26
CHMP4A-211ENST00000609024 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 A0A087WW49 117 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 FAM90A10PA6NDY2 464 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 HSPA12AO43301 675 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 HLA-DRB1P01911 266 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 LSAMPQ13449 338 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 TMEM30BQ3MIR4 351 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 LINC00596Q86U02 117 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 PARP16Q8N5Y8 322 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 OR10V1Q8NGI7 309 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 OR52N1Q8NH53 320 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 TUBA4BQ9H853 241 aa13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
CHMP4A-211ENST00000609024 TMEM212A6NML5 194 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 SNTNA6NMZ2 147 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 A8MZ25 164 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 ARPC1BO15143 372 aaKnown RBP13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 SLC31A2O15432 143 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 NBR2O15453 112 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 GYG2O15488 501 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 LANCL1O43813 399 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 CDRT1O95170 752 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 HSPB1P04792 205 aaKnown RBP13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 BLVRBP30043 206 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF137PP52743 207 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 TMEM267Q0VDI3 215 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 C6orf183Q5T699 404 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 OR5AK2Q8NH90 309 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 PELI1Q96FA3 418 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 CIB1Q99828 191 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 IFT22Q9H7X7 185 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 C19orf73Q9NVV2 129 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 FOXA2Q9Y261 457 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 A3GALT2U3KPV4 340 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 STARD9Q9P2P6 4700 aa13.38□□□□□ -0.27
CHMP4A-211ENST00000609024 IGHV7-81A0A0B4J1V7 117 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 SERPINA2P20848 420 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 RBM11P57052 281 aaKnown RBP13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 PLGLAQ15195 96 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 ATP6AP1Q15904 470 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 MPV17LQ2QL34 196 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms