RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ARF6P62330 175 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 RELBQ01201 579 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 MPV17L2Q567V2 206 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 FHL5Q5TD97 284 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 SGMS2Q8NHU3 365 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 MSI2Q96DH6 328 aaKnown RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 AGMATQ9BSE5 352 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ELOVL5Q9NYP7 299 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 DEC1Q9P2X7 70 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 MCTS1Q9ULC4 181 aaKnown RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 CACNA1IQ9P0X4 2223 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 TIAF1O95411 115 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 OPRM1P35372 400 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ARF3P61204 181 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 PAX2Q02962 417 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 POU3F1Q03052 451 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 C6orf201Q7Z4U5 140 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 LIPHQ8WWY8 451 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 LHX4Q969G2 390 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 ST6GALNAC6Q969X2 333 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 LINC00615Q96LM1 132 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 C1orf147Q96MC9 270 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
CTCFL-218ENST00000608440 GTF3C1Q12789 2109 aa10.83□□□□□ -0.68
CTCFL-218ENST00000608440 DPRXA6NFQ7 191 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 TRAF3IP2O43734 574 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 PRKNO60260 465 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 IFNA5P01569 189 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 TTRP02766 147 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 GPX1P07203 203 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 EGR1P18146 543 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 METAP1P53582 386 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 PARM1Q6UWI2 310 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 YAF2Q8IY57 180 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 STXBP6Q8NFX7 210 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 OR2M7Q8NG81 312 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 ASB10Q8WXI3 467 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 FGF14Q92915 247 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 RPP25Q9BUL9 199 aaKnown RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 WASHC3Q9Y3C0 194 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 C1QTNF9BB2RNN3 333 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 SRSF10O75494 262 aaKnown RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 TMEM267Q0VDI3 215 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 PDGFRLQ15198 375 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 TMEM95Q3KNT9 176 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 RAET1LQ5VY80 246 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 OR4C3Q8NH37 302 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 C11orf1Q9H5F2 150 aa10.82□□□□□ -0.68
CTCFL-218ENST00000608440 COA3Q9Y2R0 106 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-218ENST00000608440 CXorf51AA0A1B0GTR3 108 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 RBFOX2O43251 390 aaKnown RBP eCLIP10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ZNF253O75346 499 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ISG15P05161 165 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ASAH2BP0C7U1 165 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ZNF83P51522 516 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 PSG9Q00887 426 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 MGAT2Q10469 447 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ACKR1Q16570 336 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 LRRC10Q5BKY1 277 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ABHD12BQ7Z5M8 362 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ZIC4Q8N9L1 334 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 OR4F17Q8NGA8 305 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 LIN37Q96GY3 246 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-218ENST00000608440 CDC42EP3Q9UKI2 254 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 OR1A2Q9Y585 309 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 PGPEP1LA6NFU8 196 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 CHST1O43916 411 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 SRPXP78539 464 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 EGR4Q05215 589 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 C1QL2Q7Z5L3 287 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 ARHGEF39Q8N4T4 335 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
CTCFL-218ENST00000608440 S1PR5Q9H228 398 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 PLSCR4Q9NRQ2 329 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 PNO1Q9NRX1 252 aaKnown RBP10.81□□□□□ -0.68
CTCFL-218ENST00000608440 OBP2AQ9NY56 170 aa10.81□□□□□ -0.68
CTCFL-218ENST00000608440 HS3ST1O14792 307 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 C1QTNF9P0C862 333 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 C3orf79P0CE67 100 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 ECI1P42126 302 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 RUNX3Q13761 415 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 EMC4Q5J8M3 183 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 SPIN3Q5JUX0 258 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 MBD3L1Q8WWY6 194 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 GPHA2Q96T91 129 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
CTCFL-218ENST00000608440 A0A1B0GV72 72 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 SERTM2A0A1B0GWG4 89 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 PRSS37A4D1T9 235 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 KIAA1324LA8MWY0 1029 aaPredicted RBP10.8□□□□□ -0.68
CTCFL-218ENST00000608440 G3V4G9 280 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 ADAM20O43506 726 aa10.8□□□□□ -0.68
CTCFL-218ENST00000608440 PPIAL4GP0DN37 164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms