RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 B9A039 149 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 ATG12O94817 140 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 HOXB5P09067 269 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 ACKR3P25106 362 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 EFNA4P52798 201 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 UCP3P55916 312 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 PSG4Q00888 419 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 DEFA5Q01523 94 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 RBM39Q14498 530 aaKnown RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 EFNB3Q15768 340 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 LRP11Q86VZ4 500 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 OSR2Q8N2R0 312 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 SVBPQ8N300 66 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 C10orf105Q8TEF2 133 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 SPSB4Q96A44 273 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 GALNT14Q96FL9 552 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 SUCNR1Q9BXA5 334 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 MRPL37Q9BZE1 423 aaKnown RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 NKX6-2Q9C056 277 aaPredicted RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 MS4A7Q9GZW8 240 aaPredicted RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 ZNF286AQ9HBT8 521 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 AK3Q9UIJ7 227 aa8.9□□□□□ -0.98
LINC01001-203ENST00000607448 CARHSP1Q9Y2V2 147 aaKnown RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 SONP18583 2426 aaKnown RBP8.9□□□□□ -0.98
LINC01001-203ENST00000607448 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 ZNF816-ZNF321PA0A0X1KG74 233 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 TRIM77I1YAP6 450 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.99
LINC01001-203ENST00000607448 CST4P01036 141 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 KNG1P01042 644 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 SFTPBP07988 381 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 FCGR3AP08637 254 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 MMP7P09237 267 aaPredicted RBP8.9□□□□□ -0.99
LINC01001-203ENST00000607448 FAM157CP0CG43 387 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 ZNF728P0DKX0 622 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 CTRB1P17538 263 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 GLP1RP43220 463 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 S100A10P60903 97 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 ERVS71-1P61550 626 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 BLOC1S1P78537 153 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 PJVKQ0ZLH3 352 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 MALLQ13021 153 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.99
LINC01001-203ENST00000607448 C10orf91Q5T1B1 145 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 CTRB2Q6GPI1 263 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 CLEC2AQ6UVW9 174 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 LRTM2Q8N967 370 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 OR2AE1Q8NHA4 323 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 MAFIPQ8WZ33 124 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 FAM168AQ92567 244 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 NARS2Q96I59 477 aaKnown RBP8.9□□□□□ -0.99
LINC01001-203ENST00000607448 TSNAXQ99598 290 aaKnown RBP8.9□□□□□ -0.99
LINC01001-203ENST00000607448 SYT3Q9BQG1 590 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 AIFM2Q9BRQ8 373 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 WNT5BQ9H1J7 359 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 LPAR3Q9UBY5 353 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 FZR1Q9UM11 496 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 POMT1Q9Y6A1 747 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 HIVEP2P31629 2446 aa8.9□□□□□ -0.99
LINC01001-203ENST00000607448 IGKV1-27A0A075B6S5 117 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 IGKV1D-8A0A087WSZ0 117 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 ZNF850A8MQ14 1090 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 TOR1AO14656 332 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 SPRY1O43609 319 aaPredicted RBP8.89□□□□□ -0.99
LINC01001-203ENST00000607448 PDCD6O75340 191 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 DEDDO75618 318 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 JTBO76095 146 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 HKR1P10072 659 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 COX5BP10606 129 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 PPOXP50336 477 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 FAM3AP98173 230 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 PDZK1IP1Q13113 114 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 TAF9Q16594 264 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 SRSF7Q16629 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC01001-203ENST00000607448 ABCA11PQ4W5N1 156 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 SAXO1Q8IYX7 474 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 SPAG16Q8N0X2 631 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 CCDC71LQ8N9Z2 235 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 AKR7LQ8NHP1 331 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 TMED6Q8WW62 240 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 SMIM8Q96KF7 97 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 FAAP24Q9BTP7 215 aa8.89□□□□□ -0.99
LINC01001-203ENST00000607448 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms