RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 C4orf3Q8WVX3 66 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 TMEM138Q9NPI0 162 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 ZNF107Q9UII5 783 aaPredicted RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 RPL36Q9Y3U8 105 aaKnown RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 ZNF736B4DX44 427 aaPredicted RBP11.64□□□□□ -0.55
CTSA-216ENST00000607212 MCRIP1C9JLW8 97 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 C15orf65H3BRN8 121 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 SLC31A2O15432 143 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 TXNL1O43396 289 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 ORC5O43913 435 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 ZNF780AO75290 641 aaPredicted RBP11.64□□□□□ -0.55
CTSA-216ENST00000607212 GTF2F2P13984 249 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 MMDQ15546 238 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 MPV17LQ2QL34 196 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 RPL22L1Q6P5R6 122 aaKnown RBP11.64□□□□□ -0.55
CTSA-216ENST00000607212 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 Q8N6K4 173 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 OR8H1Q8NGG4 311 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 OR4K15Q8NH41 348 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 KCTD7Q96MP8 289 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 OR5B12Q96R08 314 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 ETAA1Q9NY74 926 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 IL36GQ9NZH8 169 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 CKLFQ9UBR5 152 aa11.64□□□□□ -0.55
CTSA-216ENST00000607212 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
CTSA-216ENST00000607212 DNAH9Q9NYC9 4486 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 F2RL1P55085 397 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 C6orf183Q5T699 404 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 SYT6Q5T7P8 510 aaPredicted RBP11.63□□□□□ -0.55
CTSA-216ENST00000607212 ASCL4Q6XD76 172 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 TMPRSS11AQ6ZMR5 421 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 RGP1Q92546 391 aaPredicted RBP11.63□□□□□ -0.55
CTSA-216ENST00000607212 ORAI1Q96D31 301 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 RBMXL1Q96E39 390 aaKnown RBP11.63□□□□□ -0.55
CTSA-216ENST00000607212 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
CTSA-216ENST00000607212 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 PARP11Q9NR21 331 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 WSB1Q9Y6I7 421 aa11.63□□□□□ -0.55
CTSA-216ENST00000607212 A0A1W2PP11 408 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 C3orf84H3BNL1 204 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 IGHG4P01861 327 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 MT-ND4P03905 459 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 GABRB1P18505 474 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 GPR176Q14439 515 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 FAM27D1Q5T7N8 215 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 ZNF529Q6P280 563 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 ZNF497Q6ZNH5 498 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
CTSA-216ENST00000607212 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 C8orf31Q8N9H6 132 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 Q8NFD4 153 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 OR1N2Q8NGR9 330 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 ZNF251Q9BRH9 671 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 C9orf16Q9BUW7 83 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 SPACA1Q9HBV2 294 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
CTSA-216ENST00000607212 C12orf77C9JDV5 145 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 HBZP02008 142 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 NKAPLQ5M9Q1 402 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 RAB12Q6IQ22 244 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 ZFP1Q6P2D0 407 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 TMEM104Q8NE00 496 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 ZNF555Q8NEP9 628 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 OR1L1Q8NH94 360 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 RHOXF1Q8NHV9 184 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 MUL1Q969V5 352 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 PLSCR3Q9NRY6 295 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 SCOCQ9UIL1 159 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 VSIG4Q9Y279 399 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 MRPS28Q9Y2Q9 187 aaKnown RBP11.61□□□□□ -0.55
CTSA-216ENST00000607212 PEX16Q9Y5Y5 336 aa11.61□□□□□ -0.55
CTSA-216ENST00000607212 LOC100130705A0A1B0GUX0 176 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 SAP30O75446 220 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 LIMS3P0CW19 117 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 LIMS4P0CW20 117 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 MYL12AP19105 171 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 ZNF616Q08AN1 781 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 TMEM30BQ3MIR4 351 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 Q3ZCU0 254 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 CCDC58Q4VC31 144 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 AWAT2Q6E213 333 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 XAF1Q6GPH4 301 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 TRAT1Q6PIZ9 186 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 GLIPR1L1Q6UWM5 242 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 FAM71E2Q8N5Q1 922 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 ST6GALNAC6Q969X2 333 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 GNB4Q9HAV0 340 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 ISYNA1Q9NPH2 558 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms